RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 STK10O94804 968 aaKnown RBP24.33■■□□□ 1.48
SIX4-203ENST00000556952 VAV1P15498 845 aa24.33■■□□□ 1.48
SIX4-203ENST00000556952 ITIH2P19823 946 aa24.33■■□□□ 1.48
SIX4-203ENST00000556952 IVDP26440 423 aa24.33■■□□□ 1.48
SIX4-203ENST00000556952 CHKAP35790 457 aa24.33■■□□□ 1.48
SIX4-203ENST00000556952 CALCOCO2Q13137 446 aa24.33■■□□□ 1.48
SIX4-203ENST00000556952 HLTFQ14527 1009 aaKnown RBP eCLIP24.33■■□□□ 1.48
SIX4-203ENST00000556952 FBXO38Q6PIJ6 1188 aa24.33■■□□□ 1.48
SIX4-203ENST00000556952 B4GALNT4Q76KP1 1039 aa24.33■■□□□ 1.48
SIX4-203ENST00000556952 TP53INP2Q8IXH6 220 aa24.33■■□□□ 1.48
SIX4-203ENST00000556952 ATPAF2Q8N5M1 289 aa24.33■■□□□ 1.48
SIX4-203ENST00000556952 HJURPQ8NCD3 748 aaPredicted RBP24.33■■□□□ 1.48
SIX4-203ENST00000556952 ING5Q8WYH8 240 aa24.33■■□□□ 1.48
SIX4-203ENST00000556952 LRRC45Q96CN5 670 aa24.33■■□□□ 1.48
SIX4-203ENST00000556952 TSGA13Q96PP4 275 aa24.33■■□□□ 1.48
SIX4-203ENST00000556952 UHRF1Q96T88 793 aaPredicted RBP24.33■■□□□ 1.48
SIX4-203ENST00000556952 SMG9Q9H0W8 520 aaKnown RBP24.33■■□□□ 1.48
SIX4-203ENST00000556952 GRHL1Q9NZI5 618 aa24.33■■□□□ 1.48
SIX4-203ENST00000556952 PAK5Q9P286 719 aa24.33■■□□□ 1.48
SIX4-203ENST00000556952 C19orf67A6NJJ6 358 aa24.32■■□□□ 1.48
SIX4-203ENST00000556952 LOC730098B7Z3J9 87 aa24.32■■□□□ 1.48
SIX4-203ENST00000556952 DFFAO00273 331 aa24.32■■□□□ 1.48
SIX4-203ENST00000556952 SEC31AO94979 1220 aaKnown RBP24.32■■□□□ 1.48
SIX4-203ENST00000556952 ZSCAN5DPP0CG00 497 aa24.32■■□□□ 1.48
SIX4-203ENST00000556952 ETS1P14921 441 aa24.32■■□□□ 1.48
SIX4-203ENST00000556952 FSHRP23945 695 aa24.32■■□□□ 1.48
SIX4-203ENST00000556952 OR1E1P30953 314 aa24.32■■□□□ 1.48
SIX4-203ENST00000556952 VPS41P49754 854 aa24.32■■□□□ 1.48
SIX4-203ENST00000556952 YBEYP58557 167 aaPredicted RBP24.32■■□□□ 1.48
SIX4-203ENST00000556952 USP4Q13107 963 aa24.32■■□□□ 1.48
SIX4-203ENST00000556952 TRADDQ15628 312 aa24.32■■□□□ 1.48
SIX4-203ENST00000556952 KCTD19Q17RG1 926 aaPredicted RBP24.32■■□□□ 1.48
SIX4-203ENST00000556952 PARP15Q460N3 678 aa24.32■■□□□ 1.48
SIX4-203ENST00000556952 CIR1Q86X95 450 aaPredicted RBP24.32■■□□□ 1.48
SIX4-203ENST00000556952 NETO2Q8NC67 525 aa24.32■■□□□ 1.48
SIX4-203ENST00000556952 P2RY11Q96G91 374 aa24.32■■□□□ 1.48
SIX4-203ENST00000556952 MYADMQ96S97 322 aa24.32■■□□□ 1.48
SIX4-203ENST00000556952 SLC39A8Q9C0K1 460 aa24.32■■□□□ 1.48
SIX4-203ENST00000556952 CCL26Q9Y258 94 aa24.32■■□□□ 1.48
SIX4-203ENST00000556952 C5orf60A6NFR6 353 aa24.31■■□□□ 1.48
SIX4-203ENST00000556952 RAMP2O60895 175 aa24.31■■□□□ 1.48
SIX4-203ENST00000556952 GCATO75600 419 aa24.31■■□□□ 1.48
SIX4-203ENST00000556952 MYBL2P10244 700 aa24.31■■□□□ 1.48
SIX4-203ENST00000556952 RPS24P62847 133 aaKnown RBP24.31■■□□□ 1.48
SIX4-203ENST00000556952 CAV1Q03135 178 aa24.31■■□□□ 1.48
SIX4-203ENST00000556952 GPS1Q13098 491 aa24.31■■□□□ 1.48
SIX4-203ENST00000556952 ZNF77Q15935 545 aa24.31■■□□□ 1.48
SIX4-203ENST00000556952 PRUNE1Q86TP1 453 aa24.31■■□□□ 1.48
SIX4-203ENST00000556952 CFAP52Q8N1V2 620 aa24.31■■□□□ 1.48
SIX4-203ENST00000556952 KIAA1958Q8N8K9 716 aa24.31■■□□□ 1.48
SIX4-203ENST00000556952 NOL6Q9H6R4 1146 aaKnown RBP24.31■■□□□ 1.48
SIX4-203ENST00000556952 NFU1Q9UMS0 254 aa24.31■■□□□ 1.48
SIX4-203ENST00000556952 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.3■■□□□ 1.48
SIX4-203ENST00000556952 ARHGAP42A6NI28 874 aa24.3■■□□□ 1.48
SIX4-203ENST00000556952 PRAMEF12O95522 483 aa24.3■■□□□ 1.48
SIX4-203ENST00000556952 CCNCP24863 283 aa24.3■■□□□ 1.48
SIX4-203ENST00000556952 ECHS1P30084 290 aa24.3■■□□□ 1.48
SIX4-203ENST00000556952 RPL22P35268 128 aaKnown RBP24.3■■□□□ 1.48
SIX4-203ENST00000556952 TIGD7Q6NT04 549 aaPredicted RBP24.3■■□□□ 1.48
SIX4-203ENST00000556952 POTEHQ6S545 545 aa24.3■■□□□ 1.48
SIX4-203ENST00000556952 BBS7Q8IWZ6 715 aa24.3■■□□□ 1.48
SIX4-203ENST00000556952 CCDC13Q8IYE1 715 aa24.3■■□□□ 1.48
SIX4-203ENST00000556952 ZSWIM3Q96MP5 696 aa24.3■■□□□ 1.48
SIX4-203ENST00000556952 MYO10Q9HD67 2058 aa24.3■■□□□ 1.48
SIX4-203ENST00000556952 DNALI1O14645 258 aaPredicted RBP24.29■■□□□ 1.48
SIX4-203ENST00000556952 TRDMT1O14717 391 aaKnown RBP24.29■■□□□ 1.48
SIX4-203ENST00000556952 GBP2P32456 591 aaPredicted RBP24.29■■□□□ 1.48
SIX4-203ENST00000556952 SGSHP51688 502 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 C6orf118Q5T5N4 469 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 EMBQ6PCB8 327 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 PCGF5Q86SE9 256 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 SETD3Q86TU7 594 aaPredicted RBP24.29■■□□□ 1.48
SIX4-203ENST00000556952 ARID3BQ8IVW6 561 aaPredicted RBP24.29■■□□□ 1.48
SIX4-203ENST00000556952 NPAS3Q8IXF0 933 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 TDRD5Q8NAT2 981 aaKnown RBP24.29■■□□□ 1.48
SIX4-203ENST00000556952 TTC16Q8NEE8 873 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 ZSCAN18Q8TBC5 510 aaPredicted RBP24.29■■□□□ 1.48
SIX4-203ENST00000556952 LRRN4Q8WUT4 740 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 ART4Q93070 314 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 VAT1Q99536 393 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 ZDHHC18Q9NUE0 388 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 A0A0A0MRY4 1105 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 RASA4BC9J798 803 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 RASA4O43374 803 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 TSPAN3O60637 253 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 OPHN1O60890 802 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 PAPOLAP51003 745 aaKnown RBP24.29■■□□□ 1.48
SIX4-203ENST00000556952 CLCN6P51797 869 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 POLD3Q15054 466 aaPredicted RBP24.29■■□□□ 1.48
SIX4-203ENST00000556952 MPP7Q5T2T1 576 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 IZUMO3Q5VZ72 239 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 ZDHHC24Q6UX98 284 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 GSPT2Q8IYD1 628 aaKnown RBP24.29■■□□□ 1.48
SIX4-203ENST00000556952 CELF5Q8N6W0 485 aaKnown RBP24.29■■□□□ 1.48
SIX4-203ENST00000556952 AENQ8WTP8 325 aaKnown RBP24.29■■□□□ 1.48
SIX4-203ENST00000556952 FATE1Q969F0 183 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 TMA16Q96EY4 203 aaKnown RBP24.29■■□□□ 1.48
SIX4-203ENST00000556952 SPATA13Q96N96 652 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 COL25A1Q9BXS0 654 aaPredicted RBP24.29■■□□□ 1.48
SIX4-203ENST00000556952 MAGEH1Q9H213 219 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms