RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ERVW-1Q9UQF0 538 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 HCN4Q9Y3Q4 1203 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 ADGRG1Q9Y653 693 aa17.94■□□□□ 0.46
SHMT2-225ENST00000556798 ILVBLA1L0T0 632 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 H3BRJ5 948 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 FGF10O15520 208 aaPredicted RBP17.93■□□□□ 0.46
SHMT2-225ENST00000556798 DAPK3O43293 454 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 SPOPO43791 374 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 PAPSS2O95340 614 aaPredicted RBP17.93■□□□□ 0.46
SHMT2-225ENST00000556798 ASLP04424 464 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 TDGF1P13385 188 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 GLDCP23378 1020 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 HTR7P34969 479 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 ACVRL1P37023 503 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 PXNP49023 591 aaPredicted RBP17.93■□□□□ 0.46
SHMT2-225ENST00000556798 CDH6P55285 790 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 ECT2LQ008S8 904 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 GNA12Q03113 381 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 DMWDQ09019 674 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 ZFYVE27Q5T4F4 411 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 HEATR6Q6AI08 1181 aaKnown RBP17.93■□□□□ 0.46
SHMT2-225ENST00000556798 KIAA1211LQ6NV74 962 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 TSTD1Q8NFU3 115 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 TPCN2Q8NHX9 752 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 MYO19Q96H55 970 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 MRGPRX3Q96LB0 322 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 NOL6Q9H6R4 1146 aaKnown RBP17.93■□□□□ 0.46
SHMT2-225ENST00000556798 ATP13A1Q9HD20 1204 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 MFHAS1Q9Y4C4 1052 aa17.93■□□□□ 0.46
SHMT2-225ENST00000556798 A0A1W2PQF6 199 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 TCRBV21S2A2A0A5A6 115 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 MACROD2A1Z1Q3 448 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 BTNL10A8MVZ5 291 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 RAMP2O60895 175 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 PTMAP06454 111 aaKnown RBP17.92■□□□□ 0.46
SHMT2-225ENST00000556798 KRT7P08729 469 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 SP9P0CG40 484 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 ERCC2P18074 760 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 ARL4AP40617 200 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 KIF5AQ12840 1032 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 MMRN1Q13201 1228 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 ENPP2Q13822 863 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 DPYSQ14117 519 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 ZNF783Q6ZMS7 281 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 POLNQ7Z5Q5 900 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 NETO2Q8NC67 525 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 PDLIM2Q96JY6 352 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 CSPG4P5Q96PW8 444 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 PPP1R9BQ96SB3 815 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 TMEM245Q9H330 911 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 MTG2Q9H4K7 406 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 VPS51Q9UID3 782 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 FBXO4Q9UKT5 387 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 ALG6Q9Y672 507 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 CACNA1HO95180 2353 aa17.92■□□□□ 0.46
SHMT2-225ENST00000556798 WASH4PA8MWX3 477 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 CBX4O00257 560 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 NPC1O15118 1278 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 NRDCO43847 1150 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 EPHX1P07099 455 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 AMPD1P23109 780 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 SLC1A1P43005 524 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 ARSEP51690 589 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 DGKEP52429 567 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 ST8SIA6P61647 398 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 SULT2A1Q06520 285 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 DPYSL3Q14195 570 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 IL31Q6EBC2 164 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 ANO7Q6IWH7 933 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 C11orf63Q6NUN7 778 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 LINGO4Q6UY18 593 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 DAAM2Q86T65 1068 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 TXLNBQ8N3L3 684 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 NPWQ8N729 165 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 DCAF4L2Q8NA75 395 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 KCTD6Q8NC69 237 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 RAPGEF5Q92565 580 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 TSC1Q92574 1164 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 ARHGEF2Q92974 986 aaKnown RBP17.91■□□□□ 0.46
SHMT2-225ENST00000556798 CELF6Q96J87 481 aaKnown RBP17.91■□□□□ 0.46
SHMT2-225ENST00000556798 PRRX2Q99811 253 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 C2orf49Q9BVC5 232 aaPredicted RBP17.91■□□□□ 0.46
SHMT2-225ENST00000556798 CALN1Q9BXU9 219 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 RETREG1Q9H6L5 497 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 SLCO3A1Q9UIG8 710 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 SLC25A13Q9UJS0 675 aa17.91■□□□□ 0.46
SHMT2-225ENST00000556798 GRID2IPA4D2P6 1211 aa17.9■□□□□ 0.46
SHMT2-225ENST00000556798 TTC34A8MYJ7 566 aa17.9■□□□□ 0.46
SHMT2-225ENST00000556798 APBB3O95704 486 aa17.9■□□□□ 0.46
SHMT2-225ENST00000556798 KRT1P04264 644 aa17.9■□□□□ 0.46
SHMT2-225ENST00000556798 SRPRAP08240 638 aaKnown RBP17.9■□□□□ 0.46
SHMT2-225ENST00000556798 IL4RP24394 825 aa17.9■□□□□ 0.46
SHMT2-225ENST00000556798 HCAR3P49019 387 aa17.9■□□□□ 0.46
SHMT2-225ENST00000556798 FNTBP49356 437 aa17.9■□□□□ 0.46
SHMT2-225ENST00000556798 ZNF135P52742 658 aaPredicted RBP17.9■□□□□ 0.46
SHMT2-225ENST00000556798 STARD3Q14849 445 aa17.9■□□□□ 0.46
SHMT2-225ENST00000556798 POLD3Q15054 466 aaPredicted RBP17.9■□□□□ 0.46
SHMT2-225ENST00000556798 E2F5Q15329 346 aa17.9■□□□□ 0.46
SHMT2-225ENST00000556798 ZNF354CQ86Y25 554 aa17.9■□□□□ 0.46
SHMT2-225ENST00000556798 FAM71BQ8TC56 605 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms