RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 MT-CYBP00156 380 aaPredicted RBP18.71■□□□□ 0.59
SDR39U1-220ENST00000556548 PYGBP11216 843 aa18.71■□□□□ 0.59
SDR39U1-220ENST00000556548 CCNCP24863 283 aa18.71■□□□□ 0.59
SDR39U1-220ENST00000556548 FOXN2P32314 431 aa18.71■□□□□ 0.59
SDR39U1-220ENST00000556548 BTG3Q14201 252 aaPredicted RBP18.71■□□□□ 0.59
SDR39U1-220ENST00000556548 CERCAMQ5T4B2 595 aa18.71■□□□□ 0.59
SDR39U1-220ENST00000556548 C1orf53Q5VUE5 145 aa18.71■□□□□ 0.59
SDR39U1-220ENST00000556548 FBXL22Q6P050 247 aa18.71■□□□□ 0.59
SDR39U1-220ENST00000556548 ZNF354CQ86Y25 554 aa18.71■□□□□ 0.59
SDR39U1-220ENST00000556548 C2orf15Q8WU43 125 aaKnown RBP18.71■□□□□ 0.59
SDR39U1-220ENST00000556548 MYEOVQ96EZ4 313 aa18.71■□□□□ 0.59
SDR39U1-220ENST00000556548 NOL6Q9H6R4 1146 aaKnown RBP18.71■□□□□ 0.59
SDR39U1-220ENST00000556548 CYP4F11Q9HBI6 524 aa18.71■□□□□ 0.59
SDR39U1-220ENST00000556548 OLA1Q9NTK5 396 aaKnown RBP18.71■□□□□ 0.59
SDR39U1-220ENST00000556548 SMG5Q9UPR3 1016 aaKnown RBP18.71■□□□□ 0.59
SDR39U1-220ENST00000556548 ATP9BO43861 1147 aa18.71■□□□□ 0.58
SDR39U1-220ENST00000556548 ASMTLO95671 621 aa18.71■□□□□ 0.58
SDR39U1-220ENST00000556548 GKAP1Q5VSY0 366 aaPredicted RBP18.71■□□□□ 0.58
SDR39U1-220ENST00000556548 KCTD11Q693B1 232 aa18.71■□□□□ 0.58
SDR39U1-220ENST00000556548 ZNF683Q8IZ20 524 aa18.71■□□□□ 0.58
SDR39U1-220ENST00000556548 LZTR1Q8N653 840 aa18.71■□□□□ 0.58
SDR39U1-220ENST00000556548 TMEM169Q96HH4 297 aa18.71■□□□□ 0.58
SDR39U1-220ENST00000556548 BTN2A3PQ96KV6 586 aa18.71■□□□□ 0.58
SDR39U1-220ENST00000556548 NACA2Q9H009 215 aa18.71■□□□□ 0.58
SDR39U1-220ENST00000556548 C11orf49Q9H6J7 331 aa18.71■□□□□ 0.58
SDR39U1-220ENST00000556548 WDR91A4D1P6 747 aa18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 FAM159BA6NKW6 160 aa18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 HTR7P34969 479 aa18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 IL9RQ01113 521 aa18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 IFT88Q13099 833 aa18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 CRYMQ14894 314 aa18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 MROH9Q5TGP6 573 aa18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 TTC39BQ5VTQ0 682 aaPredicted RBP18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 KDELC2Q7Z4H8 507 aa18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 RNF168Q8IYW5 571 aaPredicted RBP18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 TCP10LQ8TDR4 215 aa18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 SPOCK2Q92563 424 aa18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 SGSM3Q96HU1 749 aa18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 ZNF558Q96NG5 402 aa18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 VAT1Q99536 393 aa18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 ZYG11BQ9C0D3 744 aa18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 CXorf56Q9H5V9 222 aa18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 SAMD15Q9P1V8 674 aa18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 SLC17A7Q9P2U7 560 aa18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 FAM169AQ9Y6X4 670 aa18.7■□□□□ 0.58
SDR39U1-220ENST00000556548 CCDC78A2IDD5 438 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 MATN3O15232 486 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 GJB5O95377 273 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 SOD2P04179 222 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 F7P08709 466 aaPredicted RBP18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 GSTA2P09210 222 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 PGAM1P18669 254 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 TUFMP49411 452 aaKnown RBP18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 LVRNQ6Q4G3 990 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 OTOP2Q7RTS6 562 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 RPRD1AQ96P16 312 aaPredicted RBP18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 TSGA13Q96PP4 275 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 OXCT2Q9BYC2 517 aaPredicted RBP18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 RBM22Q9NW64 420 aaKnown RBP eCLIP18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 DONSONQ9NYP3 566 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 MOCS1Q9NZB8 636 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 IPO11Q9UI26 975 aaKnown RBP18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 BACE2Q9Y5Z0 518 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 RPS6KL1Q9Y6S9 549 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 SUN1O94901 812 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 ZDHHC11BP0C7U3 371 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 ERVK-10P10266 1014 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 GJA8P48165 433 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 NRG1Q02297 640 aaPredicted RBP18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 PRPSAP1Q14558 356 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 SEPT7Q16181 437 aaKnown RBP18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 HHATQ5VTY9 493 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 CHSY1Q86X52 802 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 CACNA2D3Q8IZS8 1091 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 BANPQ8N9N5 519 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 ZNF689Q96CS4 500 aaPredicted RBP18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 HMCESQ96FZ2 354 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 MAGEB18Q96M61 343 aa18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 FCRL3Q96P31 734 aaPredicted RBP18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 UBE2OQ9C0C9 1292 aaKnown RBP18.69■□□□□ 0.58
SDR39U1-220ENST00000556548 COL4A6Q14031 1691 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 J3KR12 359 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 NEBLO76041 1014 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 HLA-DQB2P05538 268 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 RAG1P15918 1043 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 ADRA1DP25100 572 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 CA8P35219 290 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 WDR5P61964 334 aaKnown RBP18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 STEAP4Q687X5 459 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 NADSYN1Q6IA69 706 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 FAM47EQ6ZV65 393 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 SLC39A11Q8N1S5 342 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 CFAP52Q8N1V2 620 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 CABS1Q96KC9 395 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 ALG13Q9NP73 1137 aaKnown RBP18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 CASS4Q9NQ75 786 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 BPTFQ12830 3046 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 KIAA0100Q14667 2235 aaKnown RBP18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 ABHD14A-ACY1A0A1B0GW23 586 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 LPXNO60711 386 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms