RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 CREB5Q02930 508 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 HNRNPA1L2Q32P51 320 aaKnown RBP11.86□□□□□ -0.51
SLIRP-205ENST00000556310 RAB6CQ53S08 254 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 ALFQ53S48 1182 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 PLA2G2CQ5R387 149 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 SH3PXD2AQ5TCZ1 1133 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 RNF219Q5W0B1 726 aaPredicted RBP11.86□□□□□ -0.51
SLIRP-205ENST00000556310 HGSNATQ68CP4 663 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 PLEKHA7Q6IQ23 1121 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 DCUN1D2Q6PH85 259 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 PRR23CQ6ZRP0 262 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 CYP2U1Q7Z449 544 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 SETD3Q86TU7 594 aaPredicted RBP11.86□□□□□ -0.51
SLIRP-205ENST00000556310 FRMD1Q8N878 549 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 OR52K2Q8NGK3 314 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 PRCCQ92733 491 aaPredicted RBP11.86□□□□□ -0.51
SLIRP-205ENST00000556310 ALG14Q96F25 216 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 TRIM11Q96F44 468 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 SIPA1Q96FS4 1042 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 CNPY3Q9BT09 278 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 RAB6CQ9H0N0 254 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 CD93Q9NPY3 652 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 PRSS16Q9NQE7 514 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 SUN2Q9UH99 717 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 LUC7L2Q9Y383 392 aaKnown RBP11.86□□□□□ -0.51
SLIRP-205ENST00000556310 OR51B4Q9Y5P0 310 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 PI4KAP42356 2102 aa11.86□□□□□ -0.51
SLIRP-205ENST00000556310 CACNA1AO00555 2505 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 GON4LQ3T8J9 2241 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 GOLGA8CPA6NN73 597 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 RTN2O75298 545 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 SERPING1P05155 500 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 RHOCP08134 193 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 ACADMP11310 421 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 DPP6P42658 865 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 DHPSP49366 369 aaPredicted RBP11.85□□□□□ -0.51
SLIRP-205ENST00000556310 ZBTB16Q05516 673 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 SCAPQ12770 1279 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 MAMLD1Q13495 774 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 TRIM14Q14142 442 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 ARTNQ5T4W7 220 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 C6orf118Q5T5N4 469 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 MANEALQ5VSG8 457 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 TFAP2DQ7Z6R9 452 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 VPS36Q86VN1 386 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 CACUL1Q86Y37 369 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 TMEFF1Q8IYR6 380 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 CCDC185Q8N715 623 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 RNF214Q8ND24 703 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 FEM1AQ9BSK4 669 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 ZYG11BQ9C0D3 744 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 MUC3BQ9H195 1237 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 OSBPL2Q9H1P3 480 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 ITM2CQ9NQX7 267 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 VPS45Q9NRW7 570 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 PARVAQ9NVD7 372 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 MPP6Q9NZW5 540 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 PPARGC1AQ9UBK2 798 aaKnown RBP11.85□□□□□ -0.51
SLIRP-205ENST00000556310 ZNF212Q9UDV6 495 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 VPS28Q9UK41 221 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.85□□□□□ -0.516e-18■□□□□ 8
SLIRP-205ENST00000556310 DCHS1Q96JQ0 3298 aa11.85□□□□□ -0.51
SLIRP-205ENST00000556310 NUMA1Q14980 2115 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 EDDM13A0A1B0GTR0 161 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 TARSL2A2RTX5 802 aaKnown RBP11.84□□□□□ -0.51
SLIRP-205ENST00000556310 TTC34A8MYJ7 566 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 PRR5-ARHGAP8B1AHC4 643 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 SRGAP2O75044 1071 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 SIN3BO75182 1162 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 FTLP02792 175 aaPredicted RBP11.84□□□□□ -0.51
SLIRP-205ENST00000556310 ZNF806P0C7X5 589 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 MYBL1P10243 752 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 CD6P30203 668 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 OXTRP30559 389 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 HOXD12P35452 270 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 NNMTP40261 264 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 PTGER3P43115 390 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 STK19P49842 368 aaPredicted RBP11.84□□□□□ -0.51
SLIRP-205ENST00000556310 TPMTP51580 245 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 AIF1P55008 147 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 RPS14P62263 151 aaKnown RBP11.84□□□□□ -0.51
SLIRP-205ENST00000556310 ARHGAP8P85298 464 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 OGDHQ02218 1023 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 CCDC6Q16204 474 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 TTC31Q49AM3 519 aaPredicted RBP11.84□□□□□ -0.51
SLIRP-205ENST00000556310 EFHC2Q5JST6 749 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 LYSMD4Q5XG99 296 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 ZNF776Q68DI1 518 aaPredicted RBP11.84□□□□□ -0.51
SLIRP-205ENST00000556310 SPECC1LQ69YQ0 1117 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 ZNF783Q6ZMS7 281 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 ARMCX6Q7L4S7 300 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 TMC6Q7Z403 805 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 C12orf50Q8NA57 414 aaPredicted RBP11.84□□□□□ -0.51
SLIRP-205ENST00000556310 DCAF4L2Q8NA75 395 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 FNIP1Q8TF40 1166 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 CPLX3Q8WVH0 158 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 ZNF653Q96CK0 615 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 RPL10LQ96L21 214 aaKnown RBP11.84□□□□□ -0.51
SLIRP-205ENST00000556310 C2orf49Q9BVC5 232 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms