RNA–Protein interactions for RNA: ENST00000556251.1

RAD51B-223, Transcript of RAD51 paralog B, human

TSL 4

Gene RAD51B, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-223	ENST00000556251	PITX1	P78337	314 aa	Predicted RBP	5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	UBXN1	Q04323	297 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	SIM2	Q14190	667 aa	Predicted RBP	5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	PPP2R5D	Q14738	602 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	TAF5	Q15542	800 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	CNGA2	Q16280	664 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	GAB4	Q2WGN9	574 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	RAB41	Q5JT25	222 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	FKBP15	Q5T1M5	1219 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	EGFLAM	Q63HQ2	1017 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	RFWD3	Q6PCD5	774 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	ZC3H14	Q6PJT7	736 aa	Known RBP	5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	FAM183BP	Q6ZVS7	135 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	TADA2B	Q86TJ2	420 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	ARHGAP18	Q8N392	663 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	SPEM1	Q8N4L4	309 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	TAB3	Q8N5C8	712 aa	Predicted RBP	5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	FRMD1	Q8N878	549 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	ZNF366	Q8N895	744 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	ZSCAN1	Q8NBB4	408 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	RNF214	Q8ND24	703 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	TSTD1	Q8NFU3	115 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	HMGB4	Q8WW32	186 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	RLN3	Q8WXF3	142 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	SORCS1	Q8WY21	1168 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	P2RY11	Q96G91	374 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	MSANTD3	Q96H12	275 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	XPO6	Q96QU8	1125 aa	Known RBP	5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	SRPK1	Q96SB4	655 aa	Known RBP	5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	ACOX2	Q99424	681 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	OSBPL6	Q9BZF3	934 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	CIPC	Q9C0C6	399 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	IRF2BPL	Q9H1B7	796 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	FAM204A	Q9H8W3	233 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	COMMD8	Q9NX08	183 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	ZSCAN32	Q9NX65	697 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	IL37	Q9NZH6	218 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	NOP53	Q9NZM5	478 aa	Known RBP	5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	TBC1D14	Q9P2M4	693 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	DEC1	Q9P2X7	70 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	KLHL3	Q9UH77	587 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	XPO7	Q9UIA9	1087 aa	Known RBP	5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	AGO1	Q9UL18	857 aa	Known RBP	5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	RAB23	Q9ULC3	237 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	CLEC4E	Q9ULY5	219 aa		5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	SMG5	Q9UPR3	1016 aa	Known RBP	5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	TMA7	Q9Y2S6	64 aa	Known RBP	5.65	□□□□□ -1.5
RAD51B-223	ENST00000556251	HELZ	P42694	1942 aa	Known RBP	5.65	□□□□□ -1.51
RAD51B-223	ENST00000556251	ATXN2	Q99700	1313 aa	Known RBP	5.65	□□□□□ -1.51
RAD51B-223	ENST00000556251	PRRT4	C9JH25	899 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251		F8W735	103 aa	Predicted RBP	5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251		K7ESF4	209 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	SGK1	O00141	431 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	PAPSS1	O43252	624 aa	Predicted RBP	5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	TBL1X	O60907	577 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	TIAF1	O95411	115 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	ERBB2	P04626	1255 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	CYBB	P04839	570 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	MME	P08473	750 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	HLA-E	P13747	358 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	DRD2	P14416	443 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	LOR	P23490	312 aa	Predicted RBP	5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	EEF1G	P26641	437 aa	Known RBP	5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	GPD2	P43304	727 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	MAGEA9	P43362	315 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	HARS2	P49590	506 aa	Known RBP	5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	TUB	P50607	506 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	TBX4	P57082	545 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	COG7	P83436	770 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	MYL5	Q02045	173 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	NME3	Q13232	169 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	PDCL	Q13371	301 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	SYCP1	Q15431	976 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	FXN	Q16595	210 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	DCAF6	Q58WW2	860 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	KLHDC7A	Q5VTJ3	777 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	SNX30	Q5VWJ9	437 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	CDCP2	Q5VXM1	449 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	SYPL2	Q5VXT5	272 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	NAA35	Q5VZE5	725 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	RAP1GAP2	Q684P5	730 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	FDX2	Q6P4F2	183 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	C1orf228	Q6PIY5	440 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	SHISA2	Q6UWI4	295 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	KIAA1324	Q6UXG2	1013 aa	Known RBP	5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	MMS22L	Q6ZRQ5	1243 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	CLEC17A	Q6ZS10	378 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	NLRC3	Q7RTR2	1065 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	BHLHA9	Q7RTU4	235 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	TAC4	Q86UU9	113 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	CIR1	Q86X95	450 aa	Predicted RBP	5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	DNAAF5	Q86Y56	855 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	HID1	Q8IV36	788 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	MCAT	Q8IVS2	390 aa	Known RBP	5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	CHPF	Q8IZ52	775 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	DEFB106A	Q8N104	65 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	CFAP52	Q8N1V2	620 aa		5.64	□□□□□ -1.51
RAD51B-223	ENST00000556251	AGGF1	Q8N302	714 aa	eCLIP	5.64	□□□□□ -1.51	2e-6	■■■■■ 35.4
RAD51B-223	ENST00000556251	CARNMT1	Q8N4J0	409 aa		5.64	□□□□□ -1.51

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