RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 RAD54BQ9Y620 910 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 COL4A2P08572 1712 aa7.83□□□□□ -1.16
TDP1-214ENST00000556063 CXorf51AA0A1B0GTR3 108 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 BDP1A6H8Y1 2624 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 RASA4BC9J798 803 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 CBX4O00257 560 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 KCNK3O14649 394 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 DCLK1O15075 740 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 ZBTB24O43167 697 aaPredicted RBP7.82□□□□□ -1.16
TDP1-214ENST00000556063 RASA4O43374 803 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 ZNF189O75820 626 aaPredicted RBP7.82□□□□□ -1.16
TDP1-214ENST00000556063 EGFP01133 1207 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 TUBB4AP04350 444 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 SRPRAP08240 638 aaKnown RBP7.82□□□□□ -1.16
TDP1-214ENST00000556063 CD48P09326 243 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 CD72P21854 359 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 TGM2P21980 687 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 IL4RP24394 825 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 TARSP26639 723 aaKnown RBP7.82□□□□□ -1.16
TDP1-214ENST00000556063 MZF1P28698 734 aaPredicted RBP7.82□□□□□ -1.16
TDP1-214ENST00000556063 PTPN7P35236 360 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 CDKN2BP42772 138 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 MARCKSL1P49006 195 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 NR2C2P49116 596 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 PEX5P50542 639 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 CLCN5P51795 746 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 ECT2LQ008S8 904 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 PAFAH1B3Q15102 231 aaKnown RBP7.82□□□□□ -1.16
TDP1-214ENST00000556063 GEN1Q17RS7 908 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 FSCBQ5H9T9 825 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 EOGTQ5NDL2 527 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 IER5LQ5T953 404 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 KAZNQ674X7 775 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 MFSD7Q6UXD7 560 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 BMP8AQ7Z5Y6 402 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 KIAA0907Q7Z7F0 614 aaPredicted RBP7.82□□□□□ -1.16
TDP1-214ENST00000556063 SLC35F6Q8N357 371 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 PHTF2Q8N3S3 785 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 ZNF513Q8N8E2 541 aaPredicted RBP7.82□□□□□ -1.16
TDP1-214ENST00000556063 KDM1BQ8NB78 822 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 TTC13Q8NBP0 860 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 PJA1Q8NG27 643 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 PCDH19Q8TAB3 1148 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 WFDC5Q8TCV5 224 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 NSMCE1Q8WV22 266 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 MAIP1Q8WWC4 291 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 CASKIN2Q8WXE0 1202 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 ALG3Q92685 438 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 TTC17Q96AE7 1141 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 PBXIP1Q96AQ6 731 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 FERMT1Q9BQL6 677 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 COL25A1Q9BXS0 654 aaPredicted RBP7.82□□□□□ -1.16
TDP1-214ENST00000556063 OSBPL8Q9BZF1 889 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 FOXQ1Q9C009 403 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 BRD8Q9H0E9 1235 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 LMAN1LQ9HAT1 526 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 FBRSL1Q9HCM7 1045 aaKnown RBP7.82□□□□□ -1.16
TDP1-214ENST00000556063 HAUS2Q9NVX0 235 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 ZNF212Q9UDV6 495 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 PACSIN2Q9UNF0 486 aaPredicted RBP7.82□□□□□ -1.16
TDP1-214ENST00000556063 NEU3Q9UQ49 428 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 CHD5Q8TDI0 1954 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 KIAA1549LQ6ZVL6 1849 aa7.82□□□□□ -1.16
TDP1-214ENST00000556063 hCG_1818297A0A087WSY0 165 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 A0A0D9SEW6 157 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 CTAGE9A4FU28 777 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 C3orf70A6NLC5 250 aaPredicted RBP7.81□□□□□ -1.16
TDP1-214ENST00000556063 USP27XA6NNY8 438 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 PRRT4C9JH25 899 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 KIF2AO00139 706 aaPredicted RBP7.81□□□□□ -1.16
TDP1-214ENST00000556063 DFFAO00273 331 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 PPP1R12AO14974 1030 aaPredicted RBP7.81□□□□□ -1.16
TDP1-214ENST00000556063 TRIM24O15164 1050 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 DDX3YO15523 660 aaKnown RBP7.81□□□□□ -1.16
TDP1-214ENST00000556063 KDELR3O43731 214 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 CST8O60676 142 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 PYGMP11217 842 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 CHRNB1P11230 501 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 HNRNPLP14866 589 aaKnown RBP eCLIP7.81□□□□□ -1.16
TDP1-214ENST00000556063 RECQLP46063 649 aaPredicted RBP7.81□□□□□ -1.16
TDP1-214ENST00000556063 RPS9P46781 194 aaKnown RBP7.81□□□□□ -1.16
TDP1-214ENST00000556063 VASPP50552 380 aaPredicted RBP7.81□□□□□ -1.16
TDP1-214ENST00000556063 CCINQ13939 588 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 STARD3Q14849 445 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 PDK1Q15118 436 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 TAZQ16635 292 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 FUT11Q495W5 492 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 FNDC3BQ53EP0 1204 aaKnown RBP7.81□□□□□ -1.16
TDP1-214ENST00000556063 C2orf27AQ580R0 203 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 TMCO4Q5TGY1 634 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 NAIF1Q69YI7 327 aaPredicted RBP7.81□□□□□ -1.16
TDP1-214ENST00000556063 SLC9A4Q6AI14 798 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 ASTLQ6HA08 431 aaPredicted RBP7.81□□□□□ -1.16
TDP1-214ENST00000556063 TIGD7Q6NT04 549 aaPredicted RBP7.81□□□□□ -1.16
TDP1-214ENST00000556063 SERPINA13PQ6UXR4 307 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 BBS12Q6ZW61 710 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 ADIPOR2Q86V24 386 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 CHPFQ8IZ52 775 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 APCDD1Q8J025 514 aa7.81□□□□□ -1.16
TDP1-214ENST00000556063 BBS5Q8N3I7 341 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms