RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 NLRP14Q86W24 1093 aa4.04□□□□□ -1.76
LINC00648-202ENST00000555985 DENND1CQ8IV53 801 aa4.04□□□□□ -1.76
LINC00648-202ENST00000555985 PASD1Q8IV76 773 aa4.04□□□□□ -1.76
LINC00648-202ENST00000555985 GSPT2Q8IYD1 628 aaKnown RBP4.04□□□□□ -1.76
LINC00648-202ENST00000555985 DEFB106AQ8N104 65 aa4.04□□□□□ -1.76
LINC00648-202ENST00000555985 CAMKK1Q8N5S9 505 aa4.04□□□□□ -1.76
LINC00648-202ENST00000555985 TMEM35BQ8NCS4 154 aa4.04□□□□□ -1.76
LINC00648-202ENST00000555985 TRIM58Q8NG06 486 aa4.04□□□□□ -1.76
LINC00648-202ENST00000555985 SREK1Q8WXA9 508 aaKnown RBP4.04□□□□□ -1.76
LINC00648-202ENST00000555985 RNF166Q96A37 237 aaPredicted RBP4.04□□□□□ -1.76
LINC00648-202ENST00000555985 ZC3H10Q96K80 434 aaKnown RBP4.04□□□□□ -1.76
LINC00648-202ENST00000555985 MRGPRX3Q96LB0 322 aa4.04□□□□□ -1.76
LINC00648-202ENST00000555985 SERPINB11Q96P15 392 aa4.04□□□□□ -1.76
LINC00648-202ENST00000555985 DNAJC7Q99615 494 aa4.04□□□□□ -1.76
LINC00648-202ENST00000555985 AGPAT1Q99943 283 aa4.04□□□□□ -1.76
LINC00648-202ENST00000555985 ISCUQ9H1K1 167 aa4.04□□□□□ -1.76
LINC00648-202ENST00000555985 TMEM245Q9H330 911 aa4.04□□□□□ -1.76
LINC00648-202ENST00000555985 SEMA4AQ9H3S1 761 aa4.04□□□□□ -1.76
LINC00648-202ENST00000555985 PIGVQ9NUD9 493 aa4.04□□□□□ -1.76
LINC00648-202ENST00000555985 RRN3Q9NYV6 651 aa4.04□□□□□ -1.76
LINC00648-202ENST00000555985 NDRG2Q9UN36 371 aaKnown RBP4.04□□□□□ -1.76
LINC00648-202ENST00000555985 LAMA1P25391 3075 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 ZNF292O60281 2723 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 LRRC53A6NM62 1247 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 H0Y858 1186 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 DDX3XO00571 662 aaKnown RBP eCLIP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 ATP6V1G2O95670 118 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 TRUB2O95900 331 aaKnown RBP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 ABL1P00519 1130 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 IRF1P10914 325 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 IMPDH2P12268 514 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 GZMAP12544 262 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 HLA-FP30511 346 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 FLT3P36888 993 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 PAPOLAP51003 745 aaKnown RBP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 TBX4P57082 545 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 NR1H3Q13133 447 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 SEMA3BQ13214 749 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 LAMB3Q13751 1172 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 RAPGEF1Q13905 1077 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 CCDC14Q49A88 953 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 MPPE1Q53F39 396 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 LACTB2Q53H82 288 aaPredicted RBP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 RAB6CQ53S08 254 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 ANKRD20A8PQ5CZ79 823 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 PLEKHA7Q6IQ23 1121 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 CXorf57Q6NSI4 855 aaKnown RBP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 UNC45BQ8IWX7 931 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 ARFGAP1Q8N6T3 406 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 FIBINQ8TAL6 211 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 CPA5Q8WXQ8 436 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 IQCDQ96DY2 449 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 STAMBPL1Q96FJ0 436 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 VCPIP1Q96JH7 1222 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 BTN2A3PQ96KV6 586 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 NUP58Q9BVL2 599 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 YIPF3Q9GZM5 350 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 MIS12Q9H081 205 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 RAB6CQ9H0N0 254 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 NOD2Q9HC29 1040 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 POLR3BQ9NW08 1133 aaPredicted RBP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 TAS2R14Q9NYV8 317 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 THAP10Q9P2Z0 257 aaPredicted RBP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 LSM7Q9UK45 103 aaKnown RBP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 INTS6Q9UL03 887 aaKnown RBP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 C15orf41Q9Y2V0 281 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 A6NHS1 94 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 SIGLEC16A6NMB1 481 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 SGK1O00141 431 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 SCAMP3O14828 347 aaKnown RBP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 NPC1O15118 1278 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 HRO43593 1189 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 BUB1BO60566 1050 aaPredicted RBP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 DNAJC8O75937 253 aaPredicted RBP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 LINGO3P0C6S8 592 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 NCAM1P13591 858 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 FERP16591 822 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 CNR2P34972 360 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 KRT9P35527 623 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 CHKAP35790 457 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 SCTRP47872 440 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 ATP1A2P50993 1020 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 COPAP53621 1224 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 ROR2Q01974 943 aaKnown RBP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 GUCY1A3Q02108 690 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 OGDHQ02218 1023 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 TCEAL1Q15170 157 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 GEN1Q17RS7 908 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 SPRED3Q2MJR0 410 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 FUT11Q495W5 492 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 BRMS1LQ5PSV4 323 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 C6orf132Q5T0Z8 1188 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 ACAD10Q6JQN1 1059 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 ASCL5Q7RTU5 278 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 METTL3Q86U44 580 aaKnown RBP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 LONP2Q86WA8 852 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 RBM12BQ8IXT5 1001 aaKnown RBP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 MCOLN2Q8IZK6 566 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 KDM1BQ8NB78 822 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 TTC13Q8NBP0 860 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms