RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ZNF778Q96MU6 729 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 SLC9A7Q96T83 725 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 NPY6RQ99463 290 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 KRT82Q9NSB4 513 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 KLK14Q9P0G3 267 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 TMEM216Q9P0N5 145 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 TRHDEQ9UKU6 1024 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 NRCAMQ92823 1304 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 A0A088AWK7 358 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.15□□□□□ -1.27
TDP1-213ENST00000555880 SMIM35A0A1B0GVV1 85 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 KCNK1O00180 336 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 LCE2BO14633 110 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 SPTLC1O15269 473 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 CCNT2O60583 730 aaKnown RBP7.15□□□□□ -1.27
TDP1-213ENST00000555880 GPR32O75388 356 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 USP1O94782 785 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 FAM200BP0CF97 657 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 SMPD1P17405 629 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 PTPN1P18031 435 aaKnown RBP7.15□□□□□ -1.27
TDP1-213ENST00000555880 PRDX6P30041 224 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 SERPINB6P35237 376 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 CCNHP51946 323 aaPredicted RBP7.15□□□□□ -1.27
TDP1-213ENST00000555880 GTF2A2P52657 109 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 ZNF135P52742 658 aaPredicted RBP7.15□□□□□ -1.27
TDP1-213ENST00000555880 EPHB1P54762 984 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 FKBP1BP68106 108 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 SLC25A3Q00325 362 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 GRIK3Q13003 919 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 CUL3Q13618 768 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 PRPSAP1Q14558 356 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 SMAD1Q15797 465 aaKnown RBP7.15□□□□□ -1.27
TDP1-213ENST00000555880 PPM1JQ5JR12 505 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 LDLRAD1Q5T700 205 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 CES3Q6UWW8 571 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 DHDDSQ86SQ9 333 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 RSPH3Q86UC2 560 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 DCLK2Q8N568 766 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 SLC25A41Q8N5S1 370 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 POU5F2Q8N7G0 328 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 C2orf69Q8N8R5 385 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 GSTCDQ8NEC7 633 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 SLC7A14Q8TBB6 771 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 ACTRT2Q8TDY3 377 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 SLC26A7Q8TE54 656 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 NT5C3BQ969T7 300 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 ISL2Q96A47 359 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 NTAN1Q96AB6 310 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 ATXN7L3BQ96GX2 97 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 AGAP3Q96P47 875 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 GBP5Q96PP8 586 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 TRAPPC9Q96Q05 1148 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 SLC2A13Q96QE2 648 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 SORT1Q99523 831 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 ECSITQ9BQ95 431 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 SYT15Q9BQS2 421 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 IL22Q9GZX6 179 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 ABHD16BQ9H3Z7 469 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 S100A14Q9HCY8 104 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 PIGVQ9NUD9 493 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 PNPOQ9NVS9 261 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 NSMCE4AQ9NXX6 385 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 DDX43Q9NXZ2 648 aaKnown RBP7.15□□□□□ -1.27
TDP1-213ENST00000555880 ARHGAP26Q9UNA1 814 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 PCDHB12Q9Y5F1 795 aa7.15□□□□□ -1.27
TDP1-213ENST00000555880 SBF1O95248 1867 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 SHROOM3Q8TF72 1996 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 A0A096LPK6 155 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 E2F8A0AVK6 867 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 DCLK1O15075 740 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 AHCYL1O43865 530 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 SNAI1O95863 264 aaPredicted RBP7.14□□□□□ -1.27
TDP1-213ENST00000555880 SMIM10L2AP0DMW4 78 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 SMIM10L2BP0DMW5 78 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 ACAT1P24752 427 aaKnown RBP7.14□□□□□ -1.27
TDP1-213ENST00000555880 PTPN3P26045 913 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 CRABP2P29373 138 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 TKTP29401 623 aaKnown RBP7.14□□□□□ -1.27
TDP1-213ENST00000555880 ADRA1BP35368 520 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 MAGEA12P43365 314 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 HCAR3P49019 387 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 NPY2RP49146 381 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 TKTL1P51854 596 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 HK2P52789 917 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 CSE1LP55060 971 aaKnown RBP7.14□□□□□ -1.27
TDP1-213ENST00000555880 LILRA4P59901 499 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 XIAPP98170 497 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 PPIDQ08752 370 aaKnown RBP7.14□□□□□ -1.27
TDP1-213ENST00000555880 SCAPQ12770 1279 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 ASPHQ12797 758 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 MPP3Q13368 585 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 ANKRD20A4Q4UJ75 823 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 INTS6LQ5JSJ4 861 aaKnown RBP7.14□□□□□ -1.27
TDP1-213ENST00000555880 ZNF618Q5T7W0 954 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 METTL21CQ5VZV1 264 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 IQSEC1Q6DN90 963 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 FSTL4Q6MZW2 842 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 RAPH1Q70E73 1250 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 LIMS2Q7Z4I7 341 aa7.14□□□□□ -1.27
TDP1-213ENST00000555880 CMC1Q7Z7K0 106 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms