RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ADPRHP54922 357 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 KRTAP10-3P60369 221 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 HLTFQ14527 1009 aaKnown RBP eCLIP3.97□□□□□ -1.77
SNX6-204ENST00000555541 HNF4GQ14541 408 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 DNTTIP2Q5QJE6 756 aaKnown RBP3.97□□□□□ -1.77
SNX6-204ENST00000555541 C10orf76Q5T2E6 689 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 OTUD1Q5VV17 481 aaPredicted RBP3.97□□□□□ -1.77
SNX6-204ENST00000555541 ARL6IP4Q66PJ3 421 aaKnown RBP3.97□□□□□ -1.77
SNX6-204ENST00000555541 C8orf82Q6P1X6 216 aaPredicted RBP3.97□□□□□ -1.77
SNX6-204ENST00000555541 TTC30AQ86WT1 665 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 SLC25A41Q8N5S1 370 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 OR2C3Q8N628 320 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 ZNF566Q969W8 418 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 FAR2Q96K12 515 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 ADAD1Q96M93 576 aaKnown RBP3.97□□□□□ -1.77
SNX6-204ENST00000555541 RIPOR3Q96MK2 946 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 OSBPL5Q9H0X9 879 aaPredicted RBP3.97□□□□□ -1.77
SNX6-204ENST00000555541 IL25Q9H293 177 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 TM7SF3Q9NS93 570 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 RNF146Q9NTX7 359 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 FBXO4Q9UKT5 387 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 CYP3A7-CYP3A51PA0A087WV96 503 aa3.96□□□□□ -1.78
SNX6-204ENST00000555541 A0A1B0GVY2 172 aa3.96□□□□□ -1.78
SNX6-204ENST00000555541 HNRNPDLO14979 420 aaKnown RBP3.96□□□□□ -1.78
SNX6-204ENST00000555541 PPM1GO15355 546 aaPredicted RBP3.96□□□□□ -1.78
SNX6-204ENST00000555541 GLP2RO95838 553 aa3.96□□□□□ -1.78
SNX6-204ENST00000555541 CYP3A4P08684 503 aa3.96□□□□□ -1.78
SNX6-204ENST00000555541 CYP3A7P24462 503 aa3.96□□□□□ -1.78
SNX6-204ENST00000555541 ITGB8P26012 769 aa3.96□□□□□ -1.78
SNX6-204ENST00000555541 RPL15P61313 204 aaKnown RBP3.96□□□□□ -1.78
SNX6-204ENST00000555541 ZBTB16Q05516 673 aa3.96□□□□□ -1.78
SNX6-204ENST00000555541 DSC1Q08554 894 aa3.96□□□□□ -1.78
SNX6-204ENST00000555541 GRSF1Q12849 480 aaKnown RBP eCLIP3.96□□□□□ -1.78
SNX6-204ENST00000555541 RAB30Q15771 203 aa3.96□□□□□ -1.78
SNX6-204ENST00000555541 MPEG1Q2M385 716 aa3.96□□□□□ -1.78
SNX6-204ENST00000555541 ZNF718Q3SXZ3 478 aa3.96□□□□□ -1.78
SNX6-204ENST00000555541 TDRD12Q587J7 1177 aaKnown RBP3.96□□□□□ -1.78
SNX6-204ENST00000555541 IZUMO3Q5VZ72 239 aa3.96□□□□□ -1.78
SNX6-204ENST00000555541 MEX3BQ6ZN04 569 aaKnown RBP3.96□□□□□ -1.78
SNX6-204ENST00000555541 C11orf96Q7Z7L8 435 aa3.96□□□□□ -1.78
SNX6-204ENST00000555541 CCAR1Q8IX12 1150 aaKnown RBP3.96□□□□□ -1.78
SNX6-204ENST00000555541 FAM217AQ8IXS0 508 aa3.96□□□□□ -1.78
SNX6-204ENST00000555541 PKP4Q99569 1192 aa3.96□□□□□ -1.78
SNX6-204ENST00000555541 B3GNT4Q9C0J1 378 aa3.96□□□□□ -1.78
SNX6-204ENST00000555541 TNFSF13BQ9Y275 285 aa3.96□□□□□ -1.78
SNX6-204ENST00000555541 CER1O95813 267 aa3.95□□□□□ -1.78
SNX6-204ENST00000555541 ANXA6P08133 673 aa3.95□□□□□ -1.78
SNX6-204ENST00000555541 GNLYP22749 145 aa3.95□□□□□ -1.78
SNX6-204ENST00000555541 HSPA7P48741 367 aa3.95□□□□□ -1.78
SNX6-204ENST00000555541 TLE3Q04726 772 aa3.95□□□□□ -1.78
SNX6-204ENST00000555541 GRM4Q14833 912 aa3.95□□□□□ -1.78
SNX6-204ENST00000555541 SF3B4Q15427 424 aaKnown RBP eCLIP3.95□□□□□ -1.78
SNX6-204ENST00000555541 LONRF1Q17RB8 773 aa3.95□□□□□ -1.78
SNX6-204ENST00000555541 ZNF672Q499Z4 452 aaPredicted RBP3.95□□□□□ -1.78
SNX6-204ENST00000555541 TMEM71Q6P5X7 295 aa3.95□□□□□ -1.78
SNX6-204ENST00000555541 ADPRHL1Q8NDY3 354 aa3.95□□□□□ -1.78
SNX6-204ENST00000555541 ZNF419Q96HQ0 510 aaPredicted RBP3.95□□□□□ -1.78
SNX6-204ENST00000555541 SORBS1Q9BX66 1292 aaKnown RBP3.95□□□□□ -1.78
SNX6-204ENST00000555541 SLC52A1Q9NWF4 448 aa3.95□□□□□ -1.78
SNX6-204ENST00000555541 A0A0B4J293 547 aa3.94□□□□□ -1.78
SNX6-204ENST00000555541 SLC16A5O15375 505 aa3.94□□□□□ -1.78
SNX6-204ENST00000555541 MSI1O43347 362 aaKnown RBP3.94□□□□□ -1.78
SNX6-204ENST00000555541 SOX30O94993 753 aa3.94□□□□□ -1.78
SNX6-204ENST00000555541 PRSS2P07478 247 aa3.94□□□□□ -1.78
SNX6-204ENST00000555541 FAM3BP58499 235 aaPredicted RBP3.94□□□□□ -1.78
SNX6-204ENST00000555541 TAS2R50P59544 299 aa3.94□□□□□ -1.78
SNX6-204ENST00000555541 RHAGQ02094 409 aa3.94□□□□□ -1.78
SNX6-204ENST00000555541 DDR1Q08345 913 aa3.94□□□□□ -1.78
SNX6-204ENST00000555541 GALNT3Q14435 633 aa3.94□□□□□ -1.78
SNX6-204ENST00000555541 MRGPRG-AS1Q2M3A8 158 aa3.94□□□□□ -1.78
SNX6-204ENST00000555541 ALG10Q5BKT4 473 aa3.94□□□□□ -1.78
SNX6-204ENST00000555541 ALG10BQ5I7T1 473 aa3.94□□□□□ -1.78
SNX6-204ENST00000555541 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
SNX6-204ENST00000555541 TRABD2AQ86V40 505 aa3.94□□□□□ -1.78
SNX6-204ENST00000555541 BICD2Q8TD16 824 aa3.94□□□□□ -1.78
SNX6-204ENST00000555541 EPS8L2Q9H6S3 715 aa3.94□□□□□ -1.78
SNX6-204ENST00000555541 CERS4Q9HA82 394 aa3.94□□□□□ -1.78
SNX6-204ENST00000555541 CEP83Q9Y592 693 aa3.94□□□□□ -1.78
SNX6-204ENST00000555541 C3orf70A6NLC5 250 aaPredicted RBP3.93□□□□□ -1.78
SNX6-204ENST00000555541 MCIDASD6RGH6 385 aa3.93□□□□□ -1.78
SNX6-204ENST00000555541 PLA2G6O60733 806 aa3.93□□□□□ -1.78
SNX6-204ENST00000555541 SOCS5O75159 536 aa3.93□□□□□ -1.78
SNX6-204ENST00000555541 ALDOAP04075 364 aaKnown RBP3.93□□□□□ -1.78
SNX6-204ENST00000555541 NPPBP16860 134 aa3.93□□□□□ -1.78
SNX6-204ENST00000555541 GNALP38405 381 aa3.93□□□□□ -1.78
SNX6-204ENST00000555541 AK2P54819 239 aa3.93□□□□□ -1.78
SNX6-204ENST00000555541 BNC1Q01954 994 aa3.93□□□□□ -1.78
SNX6-204ENST00000555541 ZRSR1Q15695 479 aaKnown RBP3.93□□□□□ -1.78
SNX6-204ENST00000555541 ANKRD40Q6AI12 368 aa3.93□□□□□ -1.78
SNX6-204ENST00000555541 WBP2NLQ6ICG8 309 aa3.93□□□□□ -1.78
SNX6-204ENST00000555541 ERAP2Q6P179 960 aa3.93□□□□□ -1.78
SNX6-204ENST00000555541 AAGABQ6PD74 315 aa3.93□□□□□ -1.78
SNX6-204ENST00000555541 TMEM88Q6PEY1 159 aa3.93□□□□□ -1.78
SNX6-204ENST00000555541 TMEM217Q8N7C4 229 aa3.93□□□□□ -1.78
SNX6-204ENST00000555541 FAM110DQ8TAY7 271 aaPredicted RBP3.93□□□□□ -1.78
SNX6-204ENST00000555541 PARD3BQ8TEW8 1205 aa3.93□□□□□ -1.78
SNX6-204ENST00000555541 IPO4Q8TEX9 1081 aaKnown RBP3.93□□□□□ -1.78
SNX6-204ENST00000555541 C18orf8Q96DM3 657 aa3.93□□□□□ -1.78
SNX6-204ENST00000555541 APOLD1Q96LR9 279 aa3.93□□□□□ -1.78
SNX6-204ENST00000555541 STK33Q9BYT3 514 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms