RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 E2F5Q15329 346 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 DCUN1D2Q6PH85 259 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 LRRC31Q6UY01 552 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 STK40Q8N2I9 435 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 GPR161Q8N6U8 529 aaKnown RBP14.04□□□□□ -0.16
SNX6-203ENST00000555416 KDM1BQ8NB78 822 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 CNPY3Q9BT09 278 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 MUC3BQ9H195 1237 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 OSBPL2Q9H1P3 480 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 RSPH9Q9H1X1 276 aaPredicted RBP14.04□□□□□ -0.16
SNX6-203ENST00000555416 GPATCH2LQ9NWQ4 482 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 ARHGAP20Q9P2F6 1191 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 SERGEFQ9UGK8 458 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 SUN2Q9UH99 717 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 VPS51Q9UID3 782 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 VPS28Q9UK41 221 aa14.04□□□□□ -0.16
SNX6-203ENST00000555416 DNAH14Q0VDD8 3507 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.03□□□□□ -0.16
SNX6-203ENST00000555416 SMAD6O43541 496 aaKnown RBP14.03□□□□□ -0.16
SNX6-203ENST00000555416 LRIG2O94898 1065 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 SERPING1P05155 500 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 OR1E1P30953 314 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 ACSL1P33121 698 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 OXCT1P55809 520 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 IRX4P78413 519 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 NRG1Q02297 640 aaPredicted RBP14.03□□□□□ -0.16
SNX6-203ENST00000555416 LMNB2Q03252 620 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 ZNF33AQ06730 810 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 SCAPQ12770 1279 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 DAB2IPQ5VWQ8 1189 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 LYSMD4Q5XG99 296 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 SCYL2Q6P3W7 929 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 LINGO4Q6UY18 593 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 SLC36A4Q6YBV0 504 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 CYP4V2Q6ZWL3 525 aaPredicted RBP14.03□□□□□ -0.16
SNX6-203ENST00000555416 TMC6Q7Z403 805 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 NLRP14Q86W24 1093 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 MMAAQ8IVH4 418 aaKnown RBP14.03□□□□□ -0.16
SNX6-203ENST00000555416 DRC7Q8IY82 874 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 NTAN1Q96AB6 310 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 ZNF653Q96CK0 615 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 ZNF419Q96HQ0 510 aaPredicted RBP14.03□□□□□ -0.16
SNX6-203ENST00000555416 HSPA12BQ96MM6 686 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 PEBP4Q96S96 227 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 GPR174Q9BXC1 333 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 ZYG11BQ9C0D3 744 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 FSCN3Q9NQT6 498 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 VPS45Q9NRW7 570 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 PARVAQ9NVD7 372 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 MYO1AQ9UBC5 1043 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 PPARGC1AQ9UBK2 798 aaKnown RBP14.03□□□□□ -0.16
SNX6-203ENST00000555416 CNOT8Q9UFF9 292 aaKnown RBP14.03□□□□□ -0.16
SNX6-203ENST00000555416 PILRBQ9UKJ0 227 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 FZD10Q9ULW2 581 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 NENFQ9UMX5 172 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 LUC7L2Q9Y383 392 aaKnown RBP14.03□□□□□ -0.16
SNX6-203ENST00000555416 ACTL7AQ9Y615 435 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 SLCO1B1Q9Y6L6 691 aa14.03□□□□□ -0.16
SNX6-203ENST00000555416 NYNRINQ9P2P1 1898 aaKnown RBP14.03□□□□□ -0.16
SNX6-203ENST00000555416 EDDM13A0A1B0GTR0 161 aa14.02□□□□□ -0.17
SNX6-203ENST00000555416 RNF103O00237 685 aa14.02□□□□□ -0.17
SNX6-203ENST00000555416 PLK4O00444 970 aa14.02□□□□□ -0.17
SNX6-203ENST00000555416 ATP9BO43861 1147 aa14.02□□□□□ -0.17
SNX6-203ENST00000555416 ZMPSTE24O75844 475 aa14.02□□□□□ -0.17
SNX6-203ENST00000555416 ACADMP11310 421 aa14.02□□□□□ -0.17
SNX6-203ENST00000555416 MAOBP27338 520 aa14.02□□□□□ -0.17
SNX6-203ENST00000555416 ACVRL1P37023 503 aa14.02□□□□□ -0.17
SNX6-203ENST00000555416 ID4P47928 161 aa14.02□□□□□ -0.17
SNX6-203ENST00000555416 DLG2Q15700 870 aa14.02□□□□□ -0.17
SNX6-203ENST00000555416 CA9Q16790 459 aa14.02□□□□□ -0.17
SNX6-203ENST00000555416 ARL13BQ3SXY8 428 aa14.02□□□□□ -0.17
SNX6-203ENST00000555416 ZNF776Q68DI1 518 aaPredicted RBP14.02□□□□□ -0.17
SNX6-203ENST00000555416 RWDD4Q6NW29 188 aaKnown RBP14.02□□□□□ -0.17
SNX6-203ENST00000555416 Q6ZVU0 165 aa14.02□□□□□ -0.17
SNX6-203ENST00000555416 SLFN11Q7Z7L1 901 aa14.02□□□□□ -0.17
SNX6-203ENST00000555416 SETD3Q86TU7 594 aaPredicted RBP14.02□□□□□ -0.17
SNX6-203ENST00000555416 VSTM4Q8IW00 320 aa14.02□□□□□ -0.17
SNX6-203ENST00000555416 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.02□□□□□ -0.17
SNX6-203ENST00000555416 NOL6Q9H6R4 1146 aaKnown RBP14.02□□□□□ -0.17
SNX6-203ENST00000555416 TMEM51Q9NW97 253 aa14.02□□□□□ -0.17
SNX6-203ENST00000555416 DLL3Q9NYJ7 618 aa14.02□□□□□ -0.17
SNX6-203ENST00000555416 LNP1A1A4G5 178 aa14.01□□□□□ -0.17
SNX6-203ENST00000555416 ILVBLA1L0T0 632 aa14.01□□□□□ -0.17
SNX6-203ENST00000555416 TARSL2A2RTX5 802 aaKnown RBP14.01□□□□□ -0.17
SNX6-203ENST00000555416 MID1O15344 667 aa14.01□□□□□ -0.17
SNX6-203ENST00000555416 NDUFS2O75306 463 aa14.01□□□□□ -0.17
SNX6-203ENST00000555416 CD160O95971 181 aa14.01□□□□□ -0.17
SNX6-203ENST00000555416 SRCP12931 536 aa14.01□□□□□ -0.17
SNX6-203ENST00000555416 TCF4P15884 667 aa14.01□□□□□ -0.17
SNX6-203ENST00000555416 PSMA2P25787 234 aa14.01□□□□□ -0.17
SNX6-203ENST00000555416 HNRNPH3P31942 346 aaKnown RBP14.01□□□□□ -0.17
SNX6-203ENST00000555416 EIF4A3P38919 411 aaKnown RBP14.01□□□□□ -0.17
SNX6-203ENST00000555416 VASPP50552 380 aaPredicted RBP14.01□□□□□ -0.17
SNX6-203ENST00000555416 GNA12Q03113 381 aa14.01□□□□□ -0.17
SNX6-203ENST00000555416 SULT2A1Q06520 285 aa14.01□□□□□ -0.17
SNX6-203ENST00000555416 SEMA3BQ13214 749 aa14.01□□□□□ -0.17
SNX6-203ENST00000555416 CST6Q15828 149 aa14.01□□□□□ -0.17
SNX6-203ENST00000555416 AASDHQ4L235 1098 aaPredicted RBP14.01□□□□□ -0.17
SNX6-203ENST00000555416 SPDYCQ5MJ68 293 aa14.01□□□□□ -0.17
SNX6-203ENST00000555416 ACBD5Q5T8D3 534 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms