RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 COL10A1Q03692 680 aa5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 SEMA3AQ14563 771 aa5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 AP5B1Q2VPB7 878 aa5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 TMEM119Q4V9L6 283 aa5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 WDR78Q5VTH9 848 aa5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 GJB7Q6PEY0 223 aa5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 TMED8Q6PL24 325 aaPredicted RBP5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 SLC22A25Q6T423 547 aa5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 C1orf122Q6ZSJ8 110 aa5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 RNF144BQ7Z419 303 aa5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 BOLLQ8N9W6 283 aaKnown RBP5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 SEMA6DQ8NFY4 1073 aa5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 OSR1Q8TAX0 266 aaPredicted RBP5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 VEZTQ9HBM0 779 aa5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 OLA1Q9NTK5 396 aaKnown RBP5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 HCN3Q9P1Z3 774 aa5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 LINC01548A6NM66 108 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 F5H0A9 414 aaPredicted RBP5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 TMEM63AO94886 807 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 RTN3O95197 1032 aaPredicted RBP5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 F9P00740 461 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 TYK2P29597 1187 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 HOXA7P31268 230 aaPredicted RBP5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 MAN1A1P33908 653 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 GGT5P36269 586 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 ARL1P40616 181 aaPredicted RBP5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 MTNR1AP48039 350 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 PTH2RP49190 550 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 CDH15P55291 814 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 RHAGQ02094 409 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 IL13RA2Q14627 380 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 SEC23BQ15437 767 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 ARL13AQ5H913 290 aaPredicted RBP5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 ZNF766Q5HY98 468 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 SH2D4BQ5SQS7 431 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 VWA5B1Q5TIE3 1220 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 PTF1AQ7RTS3 328 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 C8orf58Q8NAV2 365 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 BCAS4Q8TDM0 211 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 HASPINQ8TF76 798 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 UCMAQ8WVF2 138 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 CNOT9Q92600 299 aaKnown RBP5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 ELP4Q96EB1 424 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 CHFRQ96EP1 664 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 AGAP2Q99490 1192 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 SCAND2PQ9GZW5 306 aaPredicted RBP5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 PDCL3Q9H2J4 239 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 IKZF4Q9H2S9 585 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 UPB1Q9UBR1 384 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 SLC25A10Q9UBX3 287 aaPredicted RBP5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 DHDHQ9UQ10 334 aa5.88□□□□□ -1.47
CKS1BP1-201ENST00000555221 LRRC3CA6NJW4 275 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 MSI1O43347 362 aaKnown RBP5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 CHRM4P08173 479 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 SKIV2L2P42285 1042 aaKnown RBP5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 EIF5P55010 431 aaKnown RBP5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 YPEL5P62699 121 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 TFF2Q03403 129 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 SLC10A2Q12908 348 aaPredicted RBP5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 ZNF268Q14587 947 aaPredicted RBP5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 PRICKLE4Q2TBC4 344 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 FAM69AQ5T7M9 428 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 C4orf50Q6ZRC1 276 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 PCGF5Q86SE9 256 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 FAM98AQ8NCA5 519 aaKnown RBP5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 SLC16A11Q8NCK7 471 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 NFKBIDQ8NI38 313 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 RUFY2Q8WXA3 655 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 RAB40AQ8WXH6 277 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 MAP4K1Q92918 833 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 C5orf34Q96MH7 638 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 EYA3Q99504 573 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 PRDM13Q9H4Q3 707 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 EPHX3Q9H6B9 360 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 RIOX1Q9H6W3 641 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 Q9N2J8 555 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 MAP3K20Q9NYL2 800 aaKnown RBP5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 AASSQ9UDR5 926 aa5.87□□□□□ -1.47
CKS1BP1-201ENST00000555221 A0A087X0M5 115 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 A0A1B0GX30 115 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 A0A1W2PPH5 198 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 TEX22C9J3V5 150 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 PER2O15055 1255 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 SPTLC2O15270 562 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 NFATC1O95644 943 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 CAPN3P20807 821 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 CHRNA5P30532 468 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 TDGQ13569 410 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 GALNT3Q14435 633 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 C5orf22Q49AR2 442 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 FBXO42Q6P3S6 717 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 INO80CQ6PI98 192 aaPredicted RBP5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 LRIG3Q6UXM1 1119 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 R3HCC1LQ7Z5L2 792 aaKnown RBP5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 NEK8Q86SG6 692 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 TBC1D1Q86TI0 1168 aaPredicted RBP5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 SCAIQ8N9R8 606 aa5.86□□□□□ -1.47
CKS1BP1-201ENST00000555221 IP6K1Q92551 441 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms