RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 C11orf84Q9BUA3 381 aaPredicted RBP4.01□□□□□ -1.77
KTN1-220ENST00000555172 TUBB6Q9BUF5 446 aa4.01□□□□□ -1.77
KTN1-220ENST00000555172 POLR3CQ9BUI4 534 aaPredicted RBP4.01□□□□□ -1.77
KTN1-220ENST00000555172 SLC5A7Q9GZV3 580 aa4.01□□□□□ -1.77
KTN1-220ENST00000555172 SCAND2PQ9GZW5 306 aaPredicted RBP4.01□□□□□ -1.77
KTN1-220ENST00000555172 ABCG8Q9H221 673 aa4.01□□□□□ -1.77
KTN1-220ENST00000555172 MRPL44Q9H9J2 332 aaKnown RBP4.01□□□□□ -1.77
KTN1-220ENST00000555172 UNKLQ9H9P5 680 aaKnown RBP4.01□□□□□ -1.77
KTN1-220ENST00000555172 GIMAP4Q9NUV9 329 aa4.01□□□□□ -1.77
KTN1-220ENST00000555172 CNIH4Q9P003 139 aa4.01□□□□□ -1.77
KTN1-220ENST00000555172 TRPS1Q9UHF7 1281 aa4.01□□□□□ -1.77
KTN1-220ENST00000555172 INTS6Q9UL03 887 aaKnown RBP4.01□□□□□ -1.77
KTN1-220ENST00000555172 CA14Q9ULX7 337 aa4.01□□□□□ -1.77
KTN1-220ENST00000555172 NEU2Q9Y3R4 380 aa4.01□□□□□ -1.77
KTN1-220ENST00000555172 SESN1Q9Y6P5 492 aa4.01□□□□□ -1.77
KTN1-220ENST00000555172 CCDC187A0A096LP49 1063 aa4□□□□□ -1.77
KTN1-220ENST00000555172 LOC102723971A0A1B0GUV8 181 aa4□□□□□ -1.77
KTN1-220ENST00000555172 A0A1W2PQF6 199 aa4□□□□□ -1.77
KTN1-220ENST00000555172 A0A1W2PR48 441 aa4□□□□□ -1.77
KTN1-220ENST00000555172 LRRD1A4D1F6 860 aa4□□□□□ -1.77
KTN1-220ENST00000555172 CTAGE9A4FU28 777 aa4□□□□□ -1.77
KTN1-220ENST00000555172 CCDC151A5D8V7 595 aa4□□□□□ -1.77
KTN1-220ENST00000555172 FAM90A7PA6NKC0 464 aa4□□□□□ -1.77
KTN1-220ENST00000555172 FAM90A22PA8MWA6 464 aa4□□□□□ -1.77
KTN1-220ENST00000555172 FAM90A12PA8MX19 464 aa4□□□□□ -1.77
KTN1-220ENST00000555172 FAM90A23PA8MXZ1 464 aa4□□□□□ -1.77
KTN1-220ENST00000555172 M0QYG6 137 aa4□□□□□ -1.77
KTN1-220ENST00000555172 M0QYT0 321 aa4□□□□□ -1.77
KTN1-220ENST00000555172 MYO1CO00159 1063 aa4□□□□□ -1.77
KTN1-220ENST00000555172 CASQ2O14958 399 aaPredicted RBP4□□□□□ -1.77
KTN1-220ENST00000555172 NOL3O60936 208 aaKnown RBP4□□□□□ -1.77
KTN1-220ENST00000555172 TSC22D2O75157 780 aa4□□□□□ -1.77
KTN1-220ENST00000555172 RTN2O75298 545 aa4□□□□□ -1.77
KTN1-220ENST00000555172 KIAA0754O94854 1291 aa4□□□□□ -1.77
KTN1-220ENST00000555172 PTBP3O95758 552 aaKnown RBP4□□□□□ -1.77
KTN1-220ENST00000555172 GNAI2P04899 355 aa4□□□□□ -1.77
KTN1-220ENST00000555172 URODP06132 367 aa4□□□□□ -1.77
KTN1-220ENST00000555172 AGAP20933 346 aa4□□□□□ -1.77
KTN1-220ENST00000555172 RPA1P27694 616 aa4□□□□□ -1.77
KTN1-220ENST00000555172 HOXD10P28358 340 aa4□□□□□ -1.77
KTN1-220ENST00000555172 NTSR1P30989 418 aa4□□□□□ -1.77
KTN1-220ENST00000555172 SLC6A4P31645 630 aa4□□□□□ -1.77
KTN1-220ENST00000555172 GUCY1A2P33402 732 aa4□□□□□ -1.77
KTN1-220ENST00000555172 LIG4P49917 911 aa4□□□□□ -1.77
KTN1-220ENST00000555172 CDH15P55291 814 aa4□□□□□ -1.77
KTN1-220ENST00000555172 NME5P56597 212 aa4□□□□□ -1.77
KTN1-220ENST00000555172 UFM1P61960 85 aa4□□□□□ -1.77
KTN1-220ENST00000555172 NPRL3Q12980 569 aa4□□□□□ -1.77
KTN1-220ENST00000555172 TRA2AQ13595 282 aaKnown RBP eCLIP4□□□□□ -1.773e-7■■■■■ 31.7
KTN1-220ENST00000555172 ARHGEF7Q14155 803 aa4□□□□□ -1.77
KTN1-220ENST00000555172 LETM2Q2VYF4 491 aa4□□□□□ -1.77
KTN1-220ENST00000555172 NRN1LQ496H8 165 aa4□□□□□ -1.77
KTN1-220ENST00000555172 USP39Q53GS9 565 aaKnown RBP4□□□□□ -1.77
KTN1-220ENST00000555172 MANEALQ5VSG8 457 aa4□□□□□ -1.77
KTN1-220ENST00000555172 SERPINA13PQ6UXR4 307 aa4□□□□□ -1.77
KTN1-220ENST00000555172 UNC5CLQ8IV45 518 aa4□□□□□ -1.77
KTN1-220ENST00000555172 PLD5Q8N7P1 536 aa4□□□□□ -1.77
KTN1-220ENST00000555172 MB21D1Q8N884 522 aa4□□□□□ -1.77
KTN1-220ENST00000555172 ST7LQ8TDW4 575 aa4□□□□□ -1.77
KTN1-220ENST00000555172 CORO2AQ92828 525 aa4□□□□□ -1.77
KTN1-220ENST00000555172 INTS12Q96CB8 462 aaKnown RBP4□□□□□ -1.77
KTN1-220ENST00000555172 SAT2Q96F10 170 aaPredicted RBP4□□□□□ -1.77
KTN1-220ENST00000555172 GDAP1L1Q96MZ0 367 aa4□□□□□ -1.77
KTN1-220ENST00000555172 RAB3IPQ96QF0 476 aaPredicted RBP4□□□□□ -1.77
KTN1-220ENST00000555172 GAD1Q99259 594 aa4□□□□□ -1.77
KTN1-220ENST00000555172 PAFAH2Q99487 392 aa4□□□□□ -1.77
KTN1-220ENST00000555172 ZPBPQ9BS86 351 aa4□□□□□ -1.77
KTN1-220ENST00000555172 SYT17Q9BSW7 474 aa4□□□□□ -1.77
KTN1-220ENST00000555172 HSD3B7Q9H2F3 369 aa4□□□□□ -1.77
KTN1-220ENST00000555172 CD93Q9NPY3 652 aa4□□□□□ -1.77
KTN1-220ENST00000555172 BEX4Q9NWD9 120 aaPredicted RBP4□□□□□ -1.77
KTN1-220ENST00000555172 DKK4Q9UBT3 224 aa4□□□□□ -1.77
KTN1-220ENST00000555172 FAM153AQ9UHL3 310 aa4□□□□□ -1.77
KTN1-220ENST00000555172 APPL1Q9UKG1 709 aa4□□□□□ -1.77
KTN1-220ENST00000555172 CDC42EP3Q9UKI2 254 aa4□□□□□ -1.77
KTN1-220ENST00000555172 ZDHHC8Q9ULC8 765 aa4□□□□□ -1.77
KTN1-220ENST00000555172 PAXBP1Q9Y5B6 917 aa4□□□□□ -1.77
KTN1-220ENST00000555172 DUSP10Q9Y6W6 482 aa4□□□□□ -1.77
KTN1-220ENST00000555172 RNF103-CHMP3A0A140T963 221 aa4□□□□□ -1.77
KTN1-220ENST00000555172 TRBC2A0A5B9 178 aa4□□□□□ -1.77
KTN1-220ENST00000555172 SYCE3A1L190 88 aa4□□□□□ -1.77
KTN1-220ENST00000555172 SLC38A8A6NNN8 435 aa4□□□□□ -1.77
KTN1-220ENST00000555172 ZNF785A8K8V0 405 aa4□□□□□ -1.77
KTN1-220ENST00000555172 SGK1O00141 431 aa4□□□□□ -1.77
KTN1-220ENST00000555172 RNF103O00237 685 aa4□□□□□ -1.77
KTN1-220ENST00000555172 MCF2LO15068 1137 aa4□□□□□ -1.77
KTN1-220ENST00000555172 ZSCAN9O15535 394 aaPredicted RBP4□□□□□ -1.77
KTN1-220ENST00000555172 GUCY1B2O75343 617 aa4□□□□□ -1.77
KTN1-220ENST00000555172 DDAH2O95865 285 aa4□□□□□ -1.77
KTN1-220ENST00000555172 TPBGLP0DKB5 382 aa4□□□□□ -1.77
KTN1-220ENST00000555172 ACP5P13686 325 aa4□□□□□ -1.77
KTN1-220ENST00000555172 GABRB1P18505 474 aa4□□□□□ -1.77
KTN1-220ENST00000555172 GDI1P31150 447 aa4□□□□□ -1.77
KTN1-220ENST00000555172 HOXC8P31273 242 aa4□□□□□ -1.77
KTN1-220ENST00000555172 KCNJ1P48048 391 aa4□□□□□ -1.77
KTN1-220ENST00000555172 CD151P48509 253 aa4□□□□□ -1.77
KTN1-220ENST00000555172 ATXN3P54252 364 aaPredicted RBP4□□□□□ -1.77
KTN1-220ENST00000555172 MFAP4P55083 255 aa4□□□□□ -1.77
KTN1-220ENST00000555172 RPL7AP62424 266 aaKnown RBP4□□□□□ -1.77
KTN1-220ENST00000555172 TUBB4BP68371 445 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms