RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 ULK2Q8IYT8 1036 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 RDH11Q8TC12 318 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 LRRC40Q9H9A6 602 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 GIT1Q9Y2X7 761 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 C17orf102A2RUQ5 167 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 CASQ2O14958 399 aaPredicted RBP12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 POLBP06746 335 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 HADHAP40939 763 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 ABCE1P61221 599 aaKnown RBP12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 MRPS6P82932 125 aaKnown RBP12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 DEUP1Q05D60 604 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 MDH1BQ5I0G3 518 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 PRAMEF19Q5SWL8 479 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 METTL21CQ5VZV1 264 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 TAF2Q6P1X5 1199 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 SERINC5Q86VE9 423 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 SHKBP1Q8TBC3 707 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 LENG1Q96BZ8 264 aaPredicted RBP12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 SENP8Q96LD8 212 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 HAPLN3Q96S86 360 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 ACBD6Q9BR61 282 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 ULBP1Q9BZM6 244 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 SLC38A7Q9NVC3 462 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 OXSMQ9NWU1 459 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 FNIP2Q9P278 1114 aa12.88□□□□□ -0.35
PPP4R3A-206ENST00000554943 KRT36O76013 467 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 LINGO3P0C6S8 592 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 PSMA3P25788 255 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 CYP2C18P33260 490 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 PSMD8P48556 350 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 TMPRSS15P98073 1019 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 TRIM71Q2Q1W2 868 aaKnown RBP12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 PPM1JQ5JR12 505 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 TSTD2Q5T7W7 516 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 AAGABQ6PD74 315 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 LSMEM2Q8N112 164 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 DCLK2Q8N568 766 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 RSRC1Q96IZ7 334 aaKnown RBP12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 KCNK16Q96T55 309 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 KATNAL1Q9BW62 490 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 SLC13A1Q9BZW2 595 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 FAM96AQ9H5X1 160 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 ARNT2Q9HBZ2 717 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 DONSONQ9NYP3 566 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 NUP205Q92621 2012 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 H2AFYO75367 372 aaKnown RBP12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 LYPLA1O75608 230 aaPredicted RBP12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 F9P00740 461 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 FAM200BP0CF97 657 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 CCNCP24863 283 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 CLCNKBP51801 687 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 TRMT5Q32P41 509 aaKnown RBP12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 OR52E8Q6IFG1 317 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 EP400NLQ6ZTU2 488 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 DPP9Q86TI2 863 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 CRLF3Q8IUI8 442 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 APLFQ8IW19 511 aaPredicted RBP12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 OR52K1Q8NGK4 314 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 ZFP42Q96MM3 310 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 FCRL5Q96RD9 977 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 FAM49AQ9H0Q0 323 aaPredicted RBP12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 DYNC1LI2O43237 492 aaPredicted RBP12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 MAFKO60675 156 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 VHLP40337 213 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 SERPINB8P50452 374 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 DNAL1Q4LDG9 190 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 DPY19L2Q6NUT2 758 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 ZNF598Q86UK7 904 aaKnown RBP12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 ZC3HC1Q86WB0 502 aaKnown RBP12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 CCDC33Q8N5R6 958 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 PGLYRP2Q96PD5 576 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 SPON1Q9HCB6 807 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 FAM105AQ9NUU6 356 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 OBSL1O75147 1896 aa12.87□□□□□ -0.35
PPP4R3A-206ENST00000554943 MYADML2A6NDP7 307 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 ARL5CA6NH57 179 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 H3BNX3 289 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 GYG2O15488 501 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 KIF1CO43896 1103 aaKnown RBP12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 LTFP02788 710 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 ERVK-10P10266 1014 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 CCL14Q16627 93 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 C16orf46Q6P387 395 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 CTAGE3PQ8IX95 158 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 PTCD2Q8WV60 388 aaKnown RBP12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 AGAP2Q99490 1192 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 SYT15Q9BQS2 421 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 TMLHEQ9NVH6 421 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 VANGL2Q9ULK5 521 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 ANKRD6Q9Y2G4 727 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 FAM92AA1XBS5 289 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 I3L4J1 428 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 MAP3K7CLP57077 242 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 RPL26P61254 145 aaKnown RBP12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 UBAP2LQ14157 1087 aaKnown RBP12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 CENPLQ8N0S6 344 aaPredicted RBP12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 STYXQ8WUJ0 223 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 SMARCD1Q96GM5 515 aa12.86□□□□□ -0.35
PPP4R3A-206ENST00000554943 RANBP9Q96S59 729 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms