RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 NELFBQ8WX92 580 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 OR8D1Q8WZ84 308 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 TSC1Q92574 1164 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 BBC3Q96PG8 261 aaPredicted RBP12.86□□□□□ -0.35
RDH11-207ENST00000554731 PPP1R9BQ96SB3 815 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 PRMT1Q99873 361 aaKnown RBP12.86□□□□□ -0.35
RDH11-207ENST00000554731 FAM204AQ9H8W3 233 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 CYTH4Q9UIA0 394 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 MAN1B1Q9UKM7 699 aa12.86□□□□□ -0.35
RDH11-207ENST00000554731 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.86□□□□□ -0.35
RDH11-207ENST00000554731 TP53BP1Q12888 1972 aaPredicted RBP12.86□□□□□ -0.35
RDH11-207ENST00000554731 ARID1BQ8NFD5 2236 aaPredicted RBP12.85□□□□□ -0.35
RDH11-207ENST00000554731 THAP12O43422 761 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 RTN2O75298 545 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 GNA14O95837 355 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 AFPP02771 609 aaKnown RBP12.85□□□□□ -0.35
RDH11-207ENST00000554731 MAT2AP31153 395 aaKnown RBP12.85□□□□□ -0.35
RDH11-207ENST00000554731 CCR1P32246 355 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 VASPP50552 380 aaPredicted RBP12.85□□□□□ -0.35
RDH11-207ENST00000554731 PITX1P78337 314 aaPredicted RBP12.85□□□□□ -0.35
RDH11-207ENST00000554731 CDK17Q00537 523 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 SEMG2Q02383 582 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 OVGP1Q12889 678 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 BNIP3Q12983 259 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 TARDBPQ13148 414 aaKnown RBP eCLIP12.85□□□□□ -0.35
RDH11-207ENST00000554731 ILKQ13418 452 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 ACCSLQ4AC99 568 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 HES3Q5TGS1 186 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 SFMBT2Q5VUG0 894 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 IQCHQ86VS3 1027 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 SPATS2Q86XZ4 545 aaKnown RBP12.85□□□□□ -0.35
RDH11-207ENST00000554731 FRS2Q8WU20 508 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 ZNF606Q8WXB4 792 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 RNF34Q969K3 372 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 FAM131CQ96AQ9 280 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 CRELD1Q96HD1 420 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 UBE2TQ9NPD8 197 aaPredicted RBP12.85□□□□□ -0.35
RDH11-207ENST00000554731 DDIT4Q9NX09 232 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 SLC25A13Q9UJS0 675 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 CTNND2Q9UQB3 1225 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 DMTF1Q9Y222 760 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 AK5Q9Y6K8 562 aa12.85□□□□□ -0.35
RDH11-207ENST00000554731 SYNJ2BP-COX16A0A087WUM0 186 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 PPP1R3GB7ZBB8 358 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 C1QTNF3-AMACRE9PGA6 284 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 PLRG1O43660 514 aaKnown RBP12.84□□□□□ -0.35
RDH11-207ENST00000554731 ATP9BO43861 1147 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 CKMT2P17540 419 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 GNA15P30679 374 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 METAP1P53582 386 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 PDCLQ13371 301 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 EIF4EBP2Q13542 120 aaPredicted RBP12.84□□□□□ -0.35
RDH11-207ENST00000554731 STAT4Q14765 748 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 TAF5Q15542 800 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 SETMARQ53H47 684 aaPredicted RBP12.84□□□□□ -0.35
RDH11-207ENST00000554731 CXorf57Q6NSI4 855 aaKnown RBP12.84□□□□□ -0.35
RDH11-207ENST00000554731 FBXL22Q6P050 247 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 FBXL19Q6PCT2 694 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 LRRC69Q6ZNQ3 347 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 ENOSF1Q7L5Y1 443 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 KANSL1Q7Z3B3 1105 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 TRIM69Q86WT6 500 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 ELOA2Q8IYF1 753 aaPredicted RBP12.84□□□□□ -0.35
RDH11-207ENST00000554731 PIP4K2CQ8TBX8 421 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 RPRD1AQ96P16 312 aaPredicted RBP12.84□□□□□ -0.35
RDH11-207ENST00000554731 NRSN2Q9GZP1 204 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 COX16Q9P0S2 106 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 ARHGAP20Q9P2F6 1191 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 SARDHQ9UL12 918 aa12.84□□□□□ -0.35
RDH11-207ENST00000554731 PTPRQQ9UMZ3 2332 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.83□□□□□ -0.36
RDH11-207ENST00000554731 PRAMEF26H0Y7S4 382 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 ALOX15BO15296 676 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 RRP8O43159 456 aaKnown RBP12.83□□□□□ -0.36
RDH11-207ENST00000554731 GLI1P08151 1106 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 ZNF18P17022 549 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 MARSP56192 900 aaKnown RBP12.83□□□□□ -0.36
RDH11-207ENST00000554731 CENPCQ03188 943 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 CNTN1Q12860 1018 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 PAK1Q13153 545 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 MTA1Q13330 715 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 ZNF177Q13360 481 aaPredicted RBP12.83□□□□□ -0.36
RDH11-207ENST00000554731 AUHQ13825 339 aaKnown RBP12.83□□□□□ -0.36
RDH11-207ENST00000554731 RTP5Q14D33 572 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 DLG2Q15700 870 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 POM121L1PQ3SYA9 428 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 EFHC1Q5JVL4 640 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 AGBL4Q5VU57 503 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 DEFB106AQ8N104 65 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 ALG14Q96F25 216 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 SLC2A13Q96QE2 648 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 UBL7Q96S82 380 aaPredicted RBP12.83□□□□□ -0.36
RDH11-207ENST00000554731 FEM1AQ9BSK4 669 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 ACP6Q9NPH0 428 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 ASNSD1Q9NWL6 643 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 VPS28Q9UK41 221 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 PPM1HQ9ULR3 514 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 LOC400499M0QZD8 3231 aa12.83□□□□□ -0.36
RDH11-207ENST00000554731 MCF2LO15068 1137 aa12.82□□□□□ -0.36
RDH11-207ENST00000554731 TLX3O43711 291 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms