RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 TMEM31Q5JXX7 168 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 SPECC1Q5M775 1068 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 RARS2Q5T160 578 aaKnown RBP4.51□□□□□ -1.69
VTI1B-203ENST00000554636 GPR158Q5T848 1215 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 ALKAL1Q6UXT8 129 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 FRMD7Q6ZUT3 714 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 GPR149Q86SP6 731 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 NOP9Q86U38 636 aaKnown RBP4.51□□□□□ -1.69
VTI1B-203ENST00000554636 TMPRSS6Q8IU80 811 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 C12orf76Q8N812 135 aaPredicted RBP4.51□□□□□ -1.69
VTI1B-203ENST00000554636 CMASQ8NFW8 434 aaPredicted RBP4.51□□□□□ -1.69
VTI1B-203ENST00000554636 HASPINQ8TF76 798 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 LARP4BQ92615 738 aaKnown RBP4.51□□□□□ -1.69
VTI1B-203ENST00000554636 CALML4Q96GE6 196 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 EPSTI1Q96J88 318 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 CDK5RAP3Q96JB5 506 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 ZBTB45Q96K62 511 aaPredicted RBP4.51□□□□□ -1.69
VTI1B-203ENST00000554636 B3GALT6Q96L58 329 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 ZMAT2Q96NC0 199 aaKnown RBP4.51□□□□□ -1.69
VTI1B-203ENST00000554636 NECTIN4Q96NY8 510 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 REEP2Q9BRK0 252 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 NTPCRQ9BSD7 190 aaKnown RBP4.51□□□□□ -1.69
VTI1B-203ENST00000554636 LRFN3Q9BTN0 628 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 CCDC94Q9BW85 323 aaPredicted RBP4.51□□□□□ -1.69
VTI1B-203ENST00000554636 COLEC11Q9BWP8 271 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 OSBPL6Q9BZF3 934 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 MAN1C1Q9NR34 630 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 MRPL17Q9NRX2 175 aaKnown RBP4.51□□□□□ -1.69
VTI1B-203ENST00000554636 PARPBPQ9NWS1 579 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 ADAM28Q9UKQ2 775 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 ODF2LQ9ULJ1 636 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 SRPRBQ9Y5M8 271 aaKnown RBP4.51□□□□□ -1.69
VTI1B-203ENST00000554636 KMT2EQ8IZD2 1858 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 NOTCH4Q99466 2003 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 TSC2P49815 1807 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 SF3B1O75533 1304 aaKnown RBP eCLIP4.5□□□□□ -1.69
VTI1B-203ENST00000554636 SMIM28A0A1B0GU29 152 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 KRTAP23-1A1A580 65 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 K7ENM7 598 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 PODXLO00592 558 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 NEMP1O14524 444 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 ADAM12O43184 909 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 FAM189A1O60320 539 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 MFAP3LO75121 409 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 TADA2AO75478 443 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 TOM1L1O75674 476 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 RFPL2O75678 378 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 GLUD1P00367 558 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 C1RP00736 705 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 HARSP12081 509 aaKnown RBP4.5□□□□□ -1.69
VTI1B-203ENST00000554636 ALADP13716 330 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 RPL17P18621 184 aaKnown RBP4.5□□□□□ -1.69
VTI1B-203ENST00000554636 SP100P23497 879 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-203ENST00000554636 KLRC2P26717 231 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 TKTP29401 623 aaKnown RBP4.5□□□□□ -1.69
VTI1B-203ENST00000554636 UBA7P41226 1012 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 MTHFRP42898 656 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 CLCNKBP51801 687 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 OSTNP61366 133 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 CREMQ03060 361 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 CEBPZQ03701 1054 aaKnown RBP4.5□□□□□ -1.69
VTI1B-203ENST00000554636 ITIH3Q06033 890 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 PTPN21Q16825 1174 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 UPP1Q16831 310 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 USP41Q3LFD5 358 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 FNDC7Q5VTL7 733 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 FAM171A1Q5VUB5 890 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 CES5AQ6NT32 575 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 SLC39A4Q6P5W5 647 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 PRSS55Q6UWB4 352 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-203ENST00000554636 C15orf39Q6ZRI6 1047 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 HAUS6Q7Z4H7 955 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 APBB1IPQ7Z5R6 666 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-203ENST00000554636 STRA8Q7Z7C7 330 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 THNSL2Q86YJ6 484 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 HSCBQ8IWL3 235 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 UNC5BQ8IZJ1 945 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 LINC00301Q8NCQ3 95 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 LNX1Q8TBB1 728 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-203ENST00000554636 ZNF483Q8TF39 744 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-203ENST00000554636 RIN2Q8WYP3 895 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-203ENST00000554636 ZNF707Q96C28 371 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-203ENST00000554636 DNAJC19Q96DA6 116 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 CLIP3Q96DZ5 547 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 RPGRIP1Q96KN7 1286 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 RIPOR3Q96MK2 946 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 UROC1Q96N76 676 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 ACAP3Q96P50 834 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 RHOBTB2Q9BYZ6 727 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 ZSCAN16Q9H4T2 348 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-203ENST00000554636 PARVGQ9HBI0 331 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.5□□□□□ -1.695e-7■■■■□ 24.2
VTI1B-203ENST00000554636 AURKAIP1Q9NWT8 199 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-203ENST00000554636 FNIP2Q9P278 1114 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 ANKFY1Q9P2R3 1169 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 MTRRQ9UBK8 725 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 TUBGCP4Q9UGJ1 667 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 EVLQ9UI08 416 aaPredicted RBP4.5□□□□□ -1.69
VTI1B-203ENST00000554636 FBXW11Q9UKB1 542 aa4.5□□□□□ -1.69
VTI1B-203ENST00000554636 TBX20Q9UMR3 447 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms