RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 FAM170AA1A519 330 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 DCDC2BA2VCK2 349 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 KCNK3O14649 394 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 SLC30A4O14863 429 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 KHNYNO15037 678 aaKnown RBP12.82□□□□□ -0.36
SHMT2-214ENST00000554604 BUB1BO60566 1050 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-214ENST00000554604 HSF2BPO75031 334 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 NDUFS2O75306 463 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 GRAP2O75791 330 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 SEC31AO94979 1220 aaKnown RBP12.82□□□□□ -0.36
SHMT2-214ENST00000554604 ATP5BP06576 529 aaKnown RBP12.82□□□□□ -0.36
SHMT2-214ENST00000554604 EPHX1P07099 455 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 MMEP08473 750 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 SLC2A3P11169 496 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 PABPC1P11940 636 aaKnown RBP12.82□□□□□ -0.36
SHMT2-214ENST00000554604 POLR2EP19388 210 aaKnown RBP12.82□□□□□ -0.36
SHMT2-214ENST00000554604 SGSHP51688 502 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 CLEC16AQ2KHT3 1053 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 FUT11Q495W5 492 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 MAP9Q49MG5 647 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 FNDC3BQ53EP0 1204 aaKnown RBP12.82□□□□□ -0.36
SHMT2-214ENST00000554604 ZC3H12AQ5D1E8 599 aaKnown RBP12.82□□□□□ -0.36
SHMT2-214ENST00000554604 SPDYCQ5MJ68 293 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 TMEM215Q68D42 235 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 NADSYN1Q6IA69 706 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 TCEAL6Q6IPX3 200 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 ACAD10Q6JQN1 1059 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 PPP1R2P3Q6NXS1 205 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 TRIM72Q6ZMU5 477 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 FAM183BPQ6ZVS7 135 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 MFN1Q8IWA4 741 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 AHI1Q8N157 1196 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 KRT222Q8N1A0 295 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 RASGEF1CQ8N431 466 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 ATP6V0D2Q8N8Y2 350 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 TMEM35BQ8NCS4 154 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 TCEAL3Q969E4 200 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 SLC39A13Q96H72 371 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 BTN2A3PQ96KV6 586 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 MRGPRX1Q96LB2 322 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 PSMB7Q99436 277 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 FUT8Q9BYC5 575 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 SLC6A17Q9H1V8 727 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 PRDM16Q9HAZ2 1276 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 CD248Q9HCU0 757 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 OSGEPQ9NPF4 335 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.82□□□□□ -0.36
SHMT2-214ENST00000554604 ASNSD1Q9NWL6 643 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 DDIT4Q9NX09 232 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 COX16Q9P0S2 106 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 PACSIN2Q9UNF0 486 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-214ENST00000554604 KNL1Q8NG31 2342 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 MIF4GDA9UHW6 222 aaKnown RBP12.81□□□□□ -0.36
SHMT2-214ENST00000554604 MAP2K7O14733 419 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 ERBB2P04626 1255 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 CYP1A2P05177 515 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 TNFRSF8P28908 595 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 DPP6P42658 865 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 PTGER3P43115 390 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 RPS24P62847 133 aaKnown RBP12.81□□□□□ -0.36
SHMT2-214ENST00000554604 CDH18Q13634 790 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 ENPP2Q13822 863 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 MS4A13Q5J8X5 152 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 TAF3Q5VWG9 929 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 LYSMD4Q5XG99 296 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 MBLAC2Q68D91 279 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 RNF43Q68DV7 783 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 CHSY1Q86X52 802 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 TMPRSS6Q8IU80 811 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 SYT12Q8IV01 421 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 LGI2Q8N0V4 545 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 DEFB106AQ8N104 65 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 CARNMT1Q8N4J0 409 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 DEFB119Q8N690 84 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.81□□□□□ -0.36
SHMT2-214ENST00000554604 CYB5D2Q8WUJ1 264 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 TRIM11Q96F44 468 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 MS4A14Q96JA4 679 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 RXFP3Q9NSD7 469 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 CTTNBP2NLQ9P2B4 639 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 UVRAGQ9P2Y5 699 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 TMEM59LQ9UK28 342 aa12.81□□□□□ -0.36
SHMT2-214ENST00000554604 TTC7AQ9ULT0 858 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-214ENST00000554604 TPRP12270 2363 aaKnown RBP12.8□□□□□ -0.36
SHMT2-214ENST00000554604 IGHV1OR15-9A0A0B4J2B8 117 aa12.8□□□□□ -0.36
SHMT2-214ENST00000554604 F5H5T6 163 aa12.8□□□□□ -0.36
SHMT2-214ENST00000554604 H0Y626 953 aa12.8□□□□□ -0.36
SHMT2-214ENST00000554604 CCDC188H7C350 402 aa12.8□□□□□ -0.36
SHMT2-214ENST00000554604 DDX3YO15523 660 aaKnown RBP12.8□□□□□ -0.36
SHMT2-214ENST00000554604 IGLV3-25P01717 112 aa12.8□□□□□ -0.36
SHMT2-214ENST00000554604 DLDP09622 509 aaKnown RBP12.8□□□□□ -0.36
SHMT2-214ENST00000554604 MYBL1P10243 752 aa12.8□□□□□ -0.36
SHMT2-214ENST00000554604 ACADMP11310 421 aa12.8□□□□□ -0.36
SHMT2-214ENST00000554604 UNGP13051 313 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-214ENST00000554604 HLA-EP13747 358 aa12.8□□□□□ -0.36
SHMT2-214ENST00000554604 TACR2P21452 398 aa12.8□□□□□ -0.36
SHMT2-214ENST00000554604 KCNA4P22459 653 aa12.8□□□□□ -0.36
SHMT2-214ENST00000554604 PRKCHP24723 683 aa12.8□□□□□ -0.36
SHMT2-214ENST00000554604 CCR1P32246 355 aa12.8□□□□□ -0.36
SHMT2-214ENST00000554604 CD70P32970 193 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms