RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 VPS33AQ96AX1 596 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 EFHD2Q96C19 240 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF558Q96NG5 402 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 ZKSCAN3Q9BRR0 538 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 NT5C1AQ9BXI3 368 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 FAM129AQ9BZQ8 928 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 MVB12BQ9H7P6 319 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 NRDE2Q9H7Z3 1164 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 SFXN1Q9H9B4 322 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 NTN4Q9HB63 628 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 TCF7L1Q9HCS4 588 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 WASH6PQ9NQA3 447 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 C14orf119Q9NWQ9 140 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 IL20Q9NYY1 176 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 SPG21Q9NZD8 308 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 DLGAP2Q9P1A6 1054 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 KIF17Q9P2E2 1029 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 FAM8A1Q9UBU6 413 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 VAV3Q9UKW4 847 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 PCDHA6Q9UN73 950 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 NOC2LQ9Y3T9 749 aaKnown RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 TELO2Q9Y4R8 837 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 PCDHA8Q9Y5H6 950 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 PIEZO1Q92508 2521 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 MUC6Q6W4X9 2439 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 CYP3A7-CYP3A51PA0A087WV96 503 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ERICH2A1L162 156 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 GOLGA8IPA6NC78 632 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 OR6C74A6NCV1 312 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 C2CD4DB7Z1M9 353 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ASAP2O43150 1006 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 KRT86O43790 486 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 LILRB5O75023 590 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 PEX11AO75192 247 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 SEC22BO75396 215 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 TACC1O75410 805 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 STBD1O95210 358 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 FTCDO95954 541 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 CCNE2O96020 404 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ABCB1P08183 1280 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 DLDP09622 509 aaKnown RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 RHOQP17081 205 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 CYP3A7P24462 503 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 CHMLP26374 656 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 RPL9P32969 192 aaKnown RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 RFC1P35251 1148 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 MSH2P43246 934 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 PITPNBP48739 271 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 MLLT6P55198 1093 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 HTD2P86397 168 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 CREMQ03060 361 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 SPAG1Q07617 926 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 CBX3Q13185 183 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 CAMK2DQ13557 499 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 GALNT3Q14435 633 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 CNGA2Q16280 664 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 Q3ZCU0 254 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 CTXN3Q4LDR2 81 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF805Q5CZA5 627 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 SGO1Q5FBB7 561 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 KLHDC7AQ5VTJ3 777 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ADALQ6DHV7 355 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 MIS18BP1Q6P0N0 1132 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 KCNT2Q6UVM3 1135 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 CWC27Q6UX04 472 aaKnown RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 KRT74Q7RTS7 529 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ASCL5Q7RTU5 278 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 R3HCC1LQ7Z5L2 792 aaKnown RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 CABP7Q86V35 215 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF410Q86VK4 478 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 P3H2Q8IVL5 708 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 CAMKK1Q8N5S9 505 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 NIPA2Q8N8Q9 360 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 TDRD5Q8NAT2 981 aaKnown RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 DTWD2Q8NBA8 298 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 KREMEN2Q8NCW0 462 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 C1orf162Q8NEQ5 155 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF671Q8TAW3 534 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 MYCBPAPQ8TBZ2 947 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ZFAND2BQ8WV99 257 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ATOH1Q92858 354 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 CCDC51Q96ER9 411 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 AIFM3Q96NN9 605 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 RPRD1AQ96P16 312 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 NOX5Q96PH1 765 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 PKP4Q99569 1192 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 OCSTAMPQ9BR26 566 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ERP44Q9BS26 406 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 HGH1Q9BTY7 390 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 TRIM62Q9BVG3 475 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 BBS2Q9BXC9 721 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 TMEM120AQ9BXJ8 343 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 OXCT2Q9BYC2 517 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 LRRC2Q9BYS8 371 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 AGXT2Q9BYV1 514 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 RNF38Q9H0F5 515 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 INTS2Q9H0H0 1204 aaKnown RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 C1orf21Q9H246 121 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 CARD9Q9H257 536 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 AZI2Q9H6S1 392 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms