RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 WSB2Q9NYS7 404 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-211ENST00000554310 VPS28Q9UK41 221 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 DNAH14Q0VDD8 3507 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 LNP1A1A4G5 178 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 TARSL2A2RTX5 802 aaKnown RBP13.42□□□□□ -0.26
SHMT2-211ENST00000554310 SLC30A4O14863 429 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 SIN3BO75182 1162 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 CNTN5O94779 1100 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 GJB6O95452 261 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 DNTTP04053 509 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 RHOCP08134 193 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 DESP17661 470 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 ITPKAP23677 461 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 RRM1P23921 792 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 ZNF143P52747 638 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-211ENST00000554310 HDAC4P56524 1084 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 RPS14P62263 151 aaKnown RBP13.42□□□□□ -0.26
SHMT2-211ENST00000554310 KLHL30Q0D2K2 578 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 ELAVL3Q14576 367 aaKnown RBP13.42□□□□□ -0.26
SHMT2-211ENST00000554310 ALFQ53S48 1182 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 WDR59Q6PJI9 974 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 ERMP1Q7Z2K6 904 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 SLC41A1Q8IVJ1 513 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 CADM4Q8NFZ8 388 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 FAM172AQ8WUF8 416 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 NTAN1Q96AB6 310 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 ALG14Q96F25 216 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 ZNF419Q96HQ0 510 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-211ENST00000554310 HSPA12BQ96MM6 686 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 MCEEQ96PE7 176 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 FEM1AQ9BSK4 669 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 EDEM2Q9BV94 578 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 C2orf49Q9BVC5 232 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-211ENST00000554310 ZYG11BQ9C0D3 744 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 MUC3BQ9H195 1237 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 PCED1AQ9H1Q7 454 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 HAUS4Q9H6D7 363 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 KCND1Q9NSA2 647 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 PPARGC1AQ9UBK2 798 aaKnown RBP13.42□□□□□ -0.26
SHMT2-211ENST00000554310 SLC25A13Q9UJS0 675 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 PILRBQ9UKJ0 227 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 SCML1Q9UN30 329 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 OR51B4Q9Y5P0 310 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 SNX10Q9Y5X0 201 aa13.42□□□□□ -0.26
SHMT2-211ENST00000554310 ATXN2Q99700 1313 aaKnown RBP13.41□□□□□ -0.26
SHMT2-211ENST00000554310 MEI4A8MW99 385 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 TTC34A8MYJ7 566 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 NRDCO43847 1150 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 GDF9O60383 454 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 GZMAP12544 262 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 OR1E1P30953 314 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 ADRA1BP35368 520 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 STK19P49842 368 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-211ENST00000554310 SCAPQ12770 1279 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 SFSWAPQ12872 951 aaKnown RBP13.41□□□□□ -0.26
SHMT2-211ENST00000554310 NUMA1Q14980 2115 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 TRIM61Q5EBN2 209 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 WDR45BQ5MNZ6 344 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 PPP1R15BQ5SWA1 713 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 SYCP2LQ5T4T6 812 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 C9orf64Q5T6V5 341 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 MANEALQ5VSG8 457 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 DCUN1D2Q6PH85 259 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 ZNF783Q6ZMS7 281 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 USP30Q70CQ3 517 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 DGLUCYQ7Z3D6 616 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 ZNF571Q7Z3V5 609 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-211ENST00000554310 TFAP2DQ7Z6R9 452 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 DCAF4L2Q8NA75 395 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 OR52K2Q8NGK3 314 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 CEP76Q8TAP6 659 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 SYN2Q92777 582 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-211ENST00000554310 RPL10LQ96L21 214 aaKnown RBP13.41□□□□□ -0.26
SHMT2-211ENST00000554310 CNPY3Q9BT09 278 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 OSBPL2Q9H1P3 480 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 PABPC3Q9H361 631 aaKnown RBP13.41□□□□□ -0.26
SHMT2-211ENST00000554310 MTG2Q9H4K7 406 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 RETREG1Q9H6L5 497 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 PARVAQ9NVD7 372 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 TAS2R14Q9NYV8 317 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 MPP6Q9NZW5 540 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 SUSD2Q9UGT4 822 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 SLCO3A1Q9UIG8 710 aa13.41□□□□□ -0.26
SHMT2-211ENST00000554310 CHD5Q8TDI0 1954 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 PCDH15Q96QU1 1955 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 PATE3B3GLJ2 98 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 CCP110O43303 1012 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 SRGAP2O75044 1071 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 SKILP12757 684 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 AIF1P55008 147 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 RPL7AP62424 266 aaKnown RBP13.4□□□□□ -0.26
SHMT2-211ENST00000554310 KRT83P78385 493 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 ZBED6P86452 979 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 FOXK2Q01167 660 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 TBX2Q13207 712 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-211ENST00000554310 CST6Q15828 149 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 DUOXA1Q1HG43 343 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 RAB6CQ53S08 254 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 TDRD12Q587J7 1177 aaKnown RBP13.4□□□□□ -0.26
SHMT2-211ENST00000554310 EFHC2Q5JST6 749 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms