RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 STAP1Q9ULZ2 295 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 TBC1D30Q9Y2I9 924 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 PAXBP1Q9Y5B6 917 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 SNX11Q9Y5W9 270 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 ANKRD36A6QL64 1941 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 FREM2Q5SZK8 3169 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 LRRK1Q38SD2 2015 aa6.81□□□□□ -1.32
SLIRP-203ENST00000554074 SPEGQ15772 3267 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.8□□□□□ -1.32
SLIRP-203ENST00000554074 A0A1B0GTQ1 180 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 A0A1W2PP55 124 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 M0QYT0 321 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 FOXN3O00409 490 aaPredicted RBP6.8□□□□□ -1.32
SLIRP-203ENST00000554074 MCF2LO15068 1137 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 YKT6O15498 198 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 TNFSF14O43557 240 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 LATO43561 262 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 CLDN11O75508 207 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 RNASEH2AO75792 299 aaKnown RBP6.8□□□□□ -1.32
SLIRP-203ENST00000554074 FSBPO95073 299 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 LSM8O95777 96 aaKnown RBP6.8□□□□□ -1.32
SLIRP-203ENST00000554074 F9P00740 461 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 ERBB2P04626 1255 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 CAPNS1P04632 268 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 CYP11B1P15538 503 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 PDGFRAP16234 1089 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 EEF1GP26641 437 aaKnown RBP6.8□□□□□ -1.32
SLIRP-203ENST00000554074 GABRB2P47870 512 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 PSMD8P48556 350 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 CXCR3P49682 368 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 ADPRHP54922 357 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 CDH4P55283 916 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 APBA1Q02410 837 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 ZNF177Q13360 481 aaPredicted RBP6.8□□□□□ -1.32
SLIRP-203ENST00000554074 KCNJ12Q14500 433 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 DPCR1Q3MIW9 517 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 KLHDC7AQ5VTJ3 777 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 FAM46CQ5VWP2 391 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 OR6B2Q6IFH4 312 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 NCEH1Q6PIU2 408 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 LRSAM1Q6UWE0 723 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 CCNI2Q6ZMN8 369 aaPredicted RBP6.8□□□□□ -1.32
SLIRP-203ENST00000554074 ADAT2Q7Z6V5 191 aaKnown RBP6.8□□□□□ -1.32
SLIRP-203ENST00000554074 SETD3Q86TU7 594 aaPredicted RBP6.8□□□□□ -1.32
SLIRP-203ENST00000554074 SLCO6A1Q86UG4 719 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 SLC47A2Q86VL8 602 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 PASD1Q8IV76 773 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 ZNF683Q8IZ20 524 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 STK40Q8N2I9 435 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 AADATQ8N5Z0 425 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 GPT2Q8TD30 523 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 GANCQ8TET4 914 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 FRS2Q8WU20 508 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 ZCCHC14Q8WYQ9 949 aaKnown RBP6.8□□□□□ -1.32
SLIRP-203ENST00000554074 OR8D1Q8WZ84 308 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 RNF34Q969K3 372 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 RPL10LQ96L21 214 aaKnown RBP6.8□□□□□ -1.32
SLIRP-203ENST00000554074 C1orf74Q96LT6 269 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 RPRD1AQ96P16 312 aaPredicted RBP6.8□□□□□ -1.32
SLIRP-203ENST00000554074 FEM1AQ9BSK4 669 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 NAA15Q9BXJ9 866 aaKnown RBP6.8□□□□□ -1.32
SLIRP-203ENST00000554074 NEUROG2Q9H2A3 272 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 SYNCQ9H7C4 482 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 ERVMER34-1Q9H9K5 563 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 TOR4AQ9NXH8 423 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.8□□□□□ -1.32
SLIRP-203ENST00000554074 SLC25A13Q9UJS0 675 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 AJAP1Q9UKB5 411 aaPredicted RBP6.8□□□□□ -1.32
SLIRP-203ENST00000554074 HS3ST2Q9Y278 367 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 DAAM1Q9Y4D1 1078 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 FARP1Q9Y4F1 1045 aaPredicted RBP6.8□□□□□ -1.32
SLIRP-203ENST00000554074 OR51B4Q9Y5P0 310 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 HS3ST4Q9Y661 456 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 SLCO1B1Q9Y6L6 691 aa6.8□□□□□ -1.32
SLIRP-203ENST00000554074 ZFYVE26Q68DK2 2539 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 SHROOM3Q8TF72 1996 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 IGLV3-10A0A075B6K4 115 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 CXorf51AA0A1B0GTR3 108 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 A0A1W2PR77 199 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 FAM47DPA6NHR8 397 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 SRRM3A6NNA2 597 aaPredicted RBP6.79□□□□□ -1.32
SLIRP-203ENST00000554074 C1QTNF3-AMACRE9PGA6 284 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 H0Y8X5 98 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 PLRG1O43660 514 aaKnown RBP6.79□□□□□ -1.32
SLIRP-203ENST00000554074 PAGE1O75459 146 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 GRAP2O75791 330 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 IL1BP01584 269 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 CDK4P11802 303 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 CD38P28907 300 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 DRD3P35462 400 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 STK19P49842 368 aaPredicted RBP6.79□□□□□ -1.32
SLIRP-203ENST00000554074 CLCN6P51797 869 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 C21orf59P57076 290 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 KRT83P78385 493 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 CENPCQ03188 943 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 KCNMA1Q12791 1236 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 OVGP1Q12889 678 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 NME3Q13232 169 aa6.79□□□□□ -1.32
SLIRP-203ENST00000554074 DRAP1Q14919 205 aaPredicted RBP6.79□□□□□ -1.32
SLIRP-203ENST00000554074 SLC25A52Q3SY17 297 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms