RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 LZTR1Q8N653 840 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 ZMIZ2Q8NF64 920 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 STON2Q8WXE9 905 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 NDRG1Q92597 394 aaKnown RBP13.2□□□□□ -0.3
SHMT2-205ENST00000553474 STMN2Q93045 179 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 TSGA13Q96PP4 275 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 MTG1Q9BT17 334 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-205ENST00000553474 CCDC106Q9BWC9 280 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 DNAJB4Q9UDY4 337 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 OR12D3Q9UGF7 316 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 ST3GAL5Q9UNP4 418 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 APOBEC2Q9Y235 224 aaKnown RBP13.2□□□□□ -0.3
SHMT2-205ENST00000553474 CDY2AQ9Y6F7 541 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 SYNJ2BP-COX16A0A087WUM0 186 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 KCNK1O00180 336 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 ZNF623O75123 536 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 ENTPD5O75356 428 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 RPSAP08865 295 aaKnown RBP13.19□□□□□ -0.3
SHMT2-205ENST00000553474 SRGAP2BP0DMP2 458 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 MLH1P40692 756 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 POLD2P49005 469 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 HARS2P49590 506 aaKnown RBP13.19□□□□□ -0.3
SHMT2-205ENST00000553474 CLNS1AP54105 237 aaKnown RBP13.19□□□□□ -0.3
SHMT2-205ENST00000553474 CRADDP78560 199 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 CDH17Q12864 832 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 UPP1Q16831 310 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 TRMT5Q32P41 509 aaKnown RBP13.19□□□□□ -0.3
SHMT2-205ENST00000553474 HSF5Q4G112 596 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-205ENST00000553474 ANKRD20A4Q4UJ75 823 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 GNASQ5JWF2 1037 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 TEDDM1Q5T9Z0 273 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 FAM171BQ6P995 826 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 NET1Q7Z628 596 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-205ENST00000553474 TTC7BQ86TV6 843 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 ALYREFQ86V81 257 aaKnown RBP13.19□□□□□ -0.3
SHMT2-205ENST00000553474 CCDC33Q8N5R6 958 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 DNAAF3Q8N9W5 541 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 RNF169Q8NCN4 708 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 RDH11Q8TC12 318 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 ARMC5Q96C12 935 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 NAF1Q96HR8 494 aaKnown RBP13.19□□□□□ -0.3
SHMT2-205ENST00000553474 TEKT5Q96M29 485 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 RILPQ96NA2 401 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 PAK6Q9NQU5 681 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-205ENST00000553474 COX16Q9P0S2 106 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 NKX1-2Q9UD57 310 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-205ENST00000553474 SOX13Q9UN79 622 aa13.19□□□□□ -0.3
SHMT2-205ENST00000553474 AAR2Q9Y312 384 aaKnown RBP13.19□□□□□ -0.3
SHMT2-205ENST00000553474 PTPRDP23468 1912 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 ZCWPW2A0A1B0GU75 182 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 CCDC195A0A1B0GUA6 201 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 MYBPHLA2RUH7 354 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 ARL5CA6NH57 179 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 B2RBV5 119 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 TMEM114B3SHH9 223 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 FAM72CH0Y354 149 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 CACNG3O60359 315 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 ADAMTS4O75173 837 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 ACADSP16219 412 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 PGM1P36871 562 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 PTDSS1P48651 473 aaKnown RBP13.18□□□□□ -0.3
SHMT2-205ENST00000553474 CLCNKBP51801 687 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 TAF11Q15544 211 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 BRMS1LQ5PSV4 323 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 FAM72AQ5TYM5 149 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 CES4AQ5XG92 561 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 LHX8Q68G74 356 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 FAM72DQ6L9T8 149 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 RINLQ6ZS11 566 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 FAM72BQ86X60 149 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 LRRC49Q8IUZ0 686 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 OR52K1Q8NGK4 314 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 OR6Y1Q8NGX8 325 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 PTCD2Q8WV60 388 aaKnown RBP13.18□□□□□ -0.3
SHMT2-205ENST00000553474 DPF3Q92784 378 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 ZNF669Q96BR6 464 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-205ENST00000553474 UROC1Q96N76 676 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 ZNF570Q96NI8 536 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 GAD1Q99259 594 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 SENP6Q9GZR1 1112 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-205ENST00000553474 UPF3AQ9H1J1 476 aaKnown RBP13.18□□□□□ -0.3
SHMT2-205ENST00000553474 DMAP1Q9NPF5 467 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-205ENST00000553474 SNX15Q9NRS6 342 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 FNIP2Q9P278 1114 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 STX18Q9P2W9 335 aaKnown RBP13.18□□□□□ -0.3
SHMT2-205ENST00000553474 ANKRD6Q9Y2G4 727 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 PSAT1Q9Y617 370 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 CDY1Q9Y6F8 540 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 SHROOM3Q8TF72 1996 aa13.18□□□□□ -0.3
SHMT2-205ENST00000553474 TDRD15B5MCY1 1934 aaKnown RBP13.18□□□□□ -0.3
SHMT2-205ENST00000553474 NUP205Q92621 2012 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 FGF10O15520 208 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-205ENST00000553474 TM7SF2O76062 418 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 USP17L7P0C7H9 530 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 ERVK-10P10266 1014 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 RALBP11234 206 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 CPA3P15088 417 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 ATP6V1C1P21283 382 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 CCNCP24863 283 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 VHLP40337 213 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms