RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 C5AR1P21730 350 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 SDC4P31431 198 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 GSCP56915 257 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-207ENST00000553290 GRIK2Q13002 908 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 CLEC16AQ2KHT3 1053 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 ACCSLQ4AC99 568 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 ALFQ53S48 1182 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 IL27RAQ6UWB1 636 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 DSG4Q86SJ6 1040 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 FAM131BQ86XD5 332 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 PHF13Q86YI8 300 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-207ENST00000553290 STK40Q8N2I9 435 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 EMC1Q8N766 993 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 OR52K2Q8NGK3 314 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 PCDHB18PQ96TA0 734 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 FAM129BQ96TA1 746 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 OMDQ99983 421 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 C11orf70Q9BRQ4 267 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 OSGEPQ9NPF4 335 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 ADAM22Q9P0K1 906 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 ADAMTS1Q9UHI8 967 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 A0A1W2PP55 124 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 LRRC72A6NJI9 287 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 GIPC1O14908 333 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 GJB3O75712 270 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 RNASEH2AO75792 299 aaKnown RBP13.3□□□□□ -0.28
ACTN1-207ENST00000553290 FSBPO95073 299 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 IL1BP01584 269 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 CALB1P05937 261 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 KRT3P12035 628 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 FERP16591 822 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 GOT1P17174 413 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 CD27P26842 260 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 PMLP29590 882 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 PTPN9P43378 593 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 PSMD8P48556 350 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 NUMBP49757 651 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 AFF3P51826 1226 aaKnown RBP13.3□□□□□ -0.28
ACTN1-207ENST00000553290 ATP11AP98196 1134 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 ZNF252P-AS1Q0IIN9 211 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 PTP4A2Q12974 167 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 TEAD4Q15561 434 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 DLG2Q15700 870 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 ARL13BQ3SXY8 428 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 CCDC14Q49A88 953 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 FILIP1LQ4L180 1135 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 C6orf118Q5T5N4 469 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 KIAA0895LQ68EN5 471 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 CAVIN1Q6NZI2 390 aaKnown RBP13.3□□□□□ -0.28
ACTN1-207ENST00000553290 STRADAQ7RTN6 431 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 PIP4P1Q86T03 277 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 DEFB124Q8NES8 71 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 OR2T34Q8NGX1 318 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 FRS2Q8WU20 508 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 RXFP2Q8WXD0 754 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 OR8D1Q8WZ84 308 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 BIRC7Q96CA5 298 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 AGPAT1Q99943 283 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 C2orf49Q9BVC5 232 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-207ENST00000553290 NEUROG2Q9H2A3 272 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 RTN4Q9NQC3 1192 aaKnown RBP13.3□□□□□ -0.28
ACTN1-207ENST00000553290 TMPRSS4Q9NRS4 437 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 ANGPTL2Q9UKU9 493 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 MYO6Q9UM54 1294 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 SNX10Q9Y5X0 201 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 DOCK4Q8N1I0 1966 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 PCNX2A6NKB5 2137 aa13.3□□□□□ -0.28
ACTN1-207ENST00000553290 C2CD4BA6NLJ0 364 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 ALOX15BO15296 676 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 SRGAP2O75044 1071 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 CER1O95813 267 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 CD59P13987 128 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 VAV1P15498 845 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 OR1E1P30953 314 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 GRIA4P48058 902 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 ZNF165P49910 485 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 GALCP54803 685 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 SHC2P98077 582 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 NRG1Q02297 640 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-207ENST00000553290 HNRNPDQ14103 355 aaKnown RBP13.29□□□□□ -0.28
ACTN1-207ENST00000553290 CDO1Q16878 200 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 FAM46CQ5VWP2 391 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 ZNF783Q6ZMS7 281 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 TFAP2DQ7Z6R9 452 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 SH2D3CQ8N5H7 860 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 DCAF4L2Q8NA75 395 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 C3orf20Q8ND61 904 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 OR2I1PQ8NGU4 316 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 JOSD2Q8TAC2 188 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 PSMB7Q99436 277 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 SELENOOQ9BVL4 669 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 ZYG11BQ9C0D3 744 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 RETREG1Q9H6L5 497 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 SEPT11Q9NVA2 429 aaKnown RBP13.29□□□□□ -0.28
ACTN1-207ENST00000553290 MPP6Q9NZW5 540 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 PPARGC1AQ9UBK2 798 aaKnown RBP13.29□□□□□ -0.28
ACTN1-207ENST00000553290 SERGEFQ9UGK8 458 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 TPX2Q9ULW0 747 aaKnown RBP13.29□□□□□ -0.28
ACTN1-207ENST00000553290 HS3ST2Q9Y278 367 aa13.29□□□□□ -0.28
ACTN1-207ENST00000553290 FARP1Q9Y4F1 1045 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms