RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 RASSF3Q86WH2 238 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 LZTR1Q8N653 840 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 RTL3Q8N8U3 475 aaKnown RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 TTC17Q96AE7 1141 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 FAM111AQ96PZ2 611 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 NACA2Q9H009 215 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 SSU72Q9NP77 194 aaKnown RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 TMEM39AQ9NV64 488 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 PCMTD2Q9NV79 361 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 ZFATQ9P243 1243 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 TXNDC16Q9P2K2 825 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 MYLKQ15746 1914 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 TLR5O60602 858 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 MAFKO60675 156 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 ERVK-10P10266 1014 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 CCNCP24863 283 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 PAPOLAP51003 745 aaKnown RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 RPL10AP62906 217 aaKnown RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 CBLBQ13191 982 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 PDK4Q16654 411 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 CERCAMQ5T4B2 595 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 C6orf89Q6UWU4 347 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 KDELC2Q7Z4H8 507 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 SPATA21Q7Z572 469 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 CIR1Q86X95 450 aaPredicted RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 CNTD1Q8N815 330 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 ATP6V0D2Q8N8Y2 350 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 IPMKQ8NFU5 416 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 SLC39A13Q96H72 371 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 OXNAD1Q96HP4 312 aaPredicted RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 ZNF512Q96ME7 567 aaPredicted RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 OLA1Q9NTK5 396 aaKnown RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 ZNF180Q9UJW8 692 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 TM9SF1O15321 606 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 CNTN5O94779 1100 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 F7P08709 466 aaPredicted RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 HTR7P34969 479 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 PSEN1P49768 467 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 SLC18A1P54219 525 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 ALFQ53S48 1182 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 STEAP4Q687X5 459 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 CHSY1Q86X52 802 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 CCNJLQ8IV13 435 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 CCDC63Q8NA47 563 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 PABPC5Q96DU9 382 aaKnown RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 ATXN7L3BQ96GX2 97 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 ZNF419Q96HQ0 510 aaPredicted RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 BTN2A3PQ96KV6 586 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 RPRD1AQ96P16 312 aaPredicted RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 SRPK1Q96SB4 655 aaKnown RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 NAT9Q9BTE0 207 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 LRRC40Q9H9A6 602 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 PRDM5Q9NQX1 630 aaPredicted RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 CLIC5Q9NZA1 410 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 MOCS1Q9NZB8 636 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 PHTF1Q9UMS5 762 aa9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 USP15Q9Y4E8 981 aaPredicted RBP9.28□□□□□ -0.92
RAB3IP-218ENST00000553099 FAM92AA1XBS5 289 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 SLC38A8A6NNN8 435 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 ERI2A8K979 691 aaKnown RBP9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 TBC1D4O60343 1298 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 SUN1O94901 812 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 PARNO95453 639 aaKnown RBP9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 HLA-DQB2P05538 268 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 SMARCB1Q12824 385 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 TRIP4Q15650 581 aaPredicted RBP9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 KCTD11Q693B1 232 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 NAPEPLDQ6IQ20 393 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 MFSD3Q96ES6 412 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 CERS2Q96G23 380 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 IGSF21Q96ID5 467 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 SPATA17Q96L03 361 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 ZYG11BQ9C0D3 744 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 RBM22Q9NW64 420 aaKnown RBP eCLIP9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 IL37Q9NZH6 218 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 IPO11Q9UI26 975 aaKnown RBP9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 GGA2Q9UJY4 613 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 PSAT1Q9Y617 370 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 MATN3O15232 486 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 PMPCBO75439 489 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 DNAJB2P25686 324 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 CA8P35219 290 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 MNX1P50219 401 aaPredicted RBP9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 ITKQ08881 620 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 CDH17Q12864 832 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 ITIH4Q14624 930 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 PCSK7Q16549 785 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 TIGD7Q6NT04 549 aaPredicted RBP9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 CGB2Q6NT52 195 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 FBXL22Q6P050 247 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 CNKSR3Q6P9H4 555 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 CDHR3Q6ZTQ4 885 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 NDUFAF2Q8N183 169 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 ZSCAN18Q8TBC5 510 aaPredicted RBP9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 DPF3Q92784 378 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 IGSF8Q969P0 613 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 TMEM169Q96HH4 297 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 C1orf74Q96LT6 269 aa9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 FCRL3Q96P31 734 aaPredicted RBP9.27□□□□□ -0.93
RAB3IP-218ENST00000553099 VN1R3Q9BXE9 311 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms