RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 FAM186AA6NE01 2351 aa12.03□□□□□ -0.48
TRAFD1-209ENST00000552896 ZNF292O60281 2723 aa12.02□□□□□ -0.48
TRAFD1-209ENST00000552896 ABCA7Q8IZY2 2146 aa12.02□□□□□ -0.48
TRAFD1-209ENST00000552896 CXorf51AA0A1B0GTR3 108 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 SOWAHDA6NJG2 315 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 WASH3PC4AMC7 463 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 SYNCRIPO60506 623 aaKnown RBP12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 PROSCO94903 275 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 IPO7O95373 1038 aaKnown RBP12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 EPHX1P07099 455 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 GABRG2P18507 467 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 EPHB2P29323 1055 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 TPI1P60174 286 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 ST8SIA6P61647 398 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 SLC25A11Q02978 314 aaKnown RBP12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 CAMK2GQ13555 558 aaPredicted RBP12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 TCEAL1Q15170 157 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 SPA17Q15506 151 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 DPYSL2Q16555 572 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 DAB2IPQ5VWQ8 1189 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 RNF219Q5W0B1 726 aaPredicted RBP12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 RTL3Q8N8U3 475 aaKnown RBP12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 SPC24Q8NBT2 197 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 HMGB4Q8WW32 186 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 GAB3Q8WWW8 586 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 BTBD6Q96KE9 485 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 MRGPRX3Q96LB0 322 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 DHX35Q9H5Z1 703 aaKnown RBP12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 CATSPERBQ9H7T0 1116 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 GPATCH2LQ9NWQ4 482 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 BCCIPQ9P287 314 aaKnown RBP eCLIP12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 SLC25A13Q9UJS0 675 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 RAD54BQ9Y620 910 aa12.02□□□□□ -0.49
TRAFD1-209ENST00000552896 NUMA1Q14980 2115 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 WASH4PA8MWX3 477 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 ZBTB24O43167 697 aaPredicted RBP12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 CREB3O43889 395 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 NDUFA10O95299 355 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 TCF4P15884 667 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 NDUFV2P19404 249 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 IL1R2P27930 398 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 ARHGAP25P42331 645 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 CTSOP43234 321 aaPredicted RBP12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 PXNP49023 591 aaPredicted RBP12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 GSDMDP57764 484 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 KRT83P78385 493 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 GNA12Q03113 381 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 CA9Q16790 459 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 HNRNPA1L2Q32P51 320 aaKnown RBP12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 BOLA3Q53S33 107 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 TMEM139Q8IV31 216 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 SLC35G2Q8TBE7 412 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 KCTD15Q96SI1 283 aaPredicted RBP12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 PSMB7Q99436 277 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 BAG1Q99933 345 aaPredicted RBP12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 MAGEB5Q9BZ81 275 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 TPSD1Q9BZJ3 242 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 OSGEPQ9NPF4 335 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 DONSONQ9NYP3 566 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 VPS51Q9UID3 782 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 HS3ST2Q9Y278 367 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 RIF1Q5UIP0 2472 aaKnown RBP12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 PI4KAP42356 2102 aa12.01□□□□□ -0.49
TRAFD1-209ENST00000552896 ZFHX2Q9C0A1 2572 aaPredicted RBP12□□□□□ -0.49
TRAFD1-209ENST00000552896 A0A0A6YYK5 440 aaPredicted RBP12□□□□□ -0.49
TRAFD1-209ENST00000552896 A0A0D9SEW6 157 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 EDDM13A0A1B0GTR0 161 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 EEF2KO00418 725 aaKnown RBP12□□□□□ -0.49
TRAFD1-209ENST00000552896 RAMP2O60895 175 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 RPP40O75818 363 aaKnown RBP12□□□□□ -0.49
TRAFD1-209ENST00000552896 HLA-EP13747 358 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 NNMTP40261 264 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 MAGEA1P43355 309 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 HCAR3P49019 387 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 STK19P49842 368 aaPredicted RBP12□□□□□ -0.49
TRAFD1-209ENST00000552896 COPAP53621 1224 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 HADHBP55084 474 aaKnown RBP12□□□□□ -0.49
TRAFD1-209ENST00000552896 DPYSQ14117 519 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 HADHQ16836 314 aaKnown RBP12□□□□□ -0.49
TRAFD1-209ENST00000552896 SMTNL2Q2TAL5 461 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 PPP6R3Q5H9R7 873 aaPredicted RBP12□□□□□ -0.49
TRAFD1-209ENST00000552896 RFX8Q6ZV50 586 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 C11orf74Q86VG3 221 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 ZNF366Q8N895 744 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 OR7D4Q8NG98 312 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 OR2T3Q8NH03 318 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 NKD2Q969F2 451 aaPredicted RBP12□□□□□ -0.49
TRAFD1-209ENST00000552896 FAM122AQ96E09 287 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 SPACA7Q96KW9 195 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 RPL10LQ96L21 214 aaKnown RBP12□□□□□ -0.49
TRAFD1-209ENST00000552896 MRGPRX1Q96LB2 322 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 PHOX2BQ99453 314 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 MAGEH1Q9H213 219 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 ZWILCHQ9H900 591 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 GRPEL1Q9HAV7 217 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 ATP13A1Q9HD20 1204 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 NDFIP2Q9NV92 336 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 RCOR3Q9P2K3 495 aaPredicted RBP12□□□□□ -0.49
TRAFD1-209ENST00000552896 SUN2Q9UH99 717 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms