RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 FAM49BQ9NUQ9 324 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.61□□□□□ -1.51
HOXB3-213ENST00000552000 FBXL12Q9NXK8 326 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 SEL1LQ9UBV2 794 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 SERGEFQ9UGK8 458 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 RASAL2Q9UJF2 1139 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 NAGPAQ9UK23 515 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 LIMCH1Q9UPQ0 1083 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 SCML2Q9UQR0 700 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 NCKAP1Q9Y2A7 1128 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 ZNF510Q9Y2H8 683 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 FBN2P35556 2912 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 A0A1W2PP55 124 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 SERTM1A2A2V5 107 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 LRRC72A6NJI9 287 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 TLR4O00206 839 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 TRIM38O00635 465 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 MID1O15344 667 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 TIMM44O43615 452 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 OPA1O60313 960 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 CSO75390 466 aaKnown RBP5.6□□□□□ -1.51
HOXB3-213ENST00000552000 GP1BBP13224 206 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 MYF5P13349 255 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 IDEP14735 1019 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 ACP1P24666 158 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 ADORA2BP29275 332 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 NOS3P29474 1203 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 HLA-FP30511 346 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 CD97P48960 835 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 NXPH1P58417 271 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 EFEMP1Q12805 493 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 TRPC3Q13507 836 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 ZSCAN23Q3MJ62 389 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 CDCP2Q5VXM1 449 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 KLHDC10Q6PID8 442 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 USP30Q70CQ3 517 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 CHST9Q7L1S5 443 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 KANSL1Q7Z3B3 1105 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 SPATS2Q86XZ4 545 aaKnown RBP5.6□□□□□ -1.51
HOXB3-213ENST00000552000 DENND1CQ8IV53 801 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 ZC3H3Q8IXZ2 948 aaKnown RBP5.6□□□□□ -1.51
HOXB3-213ENST00000552000 OXR1Q8N573 874 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 WFIKKN2Q8TEU8 576 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 GOLGA1Q92805 767 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 CCDC127Q96BQ5 260 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 SERAC1Q96JX3 654 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 MEGF10Q96KG7 1140 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 TNIP3Q96KP6 325 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 DEPDC7Q96QD5 511 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 KRTAP4-2Q9BYR5 136 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 SLC2A11Q9BYW1 496 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 DPH1Q9BZG8 443 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 DCLK3Q9C098 648 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 OSBPL2Q9H1P3 480 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 NEUROG2Q9H2A3 272 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 PABPC3Q9H361 631 aaKnown RBP5.6□□□□□ -1.51
HOXB3-213ENST00000552000 POLR1BQ9H9Y6 1135 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 THSD1Q9NS62 852 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 AGO1Q9UL18 857 aaKnown RBP5.6□□□□□ -1.51
HOXB3-213ENST00000552000 PLA2G4CQ9UP65 541 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 PCNX1Q96RV3 2341 aa5.6□□□□□ -1.51
HOXB3-213ENST00000552000 SVILO95425 2214 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 A0A1B0GVM2 712 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 A0A1W2PNU3 283 aaPredicted RBP5.59□□□□□ -1.51
HOXB3-213ENST00000552000 SLC12A8A0AV02 714 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 HHLA1C9JL84 531 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 KIAA0391O15091 583 aaKnown RBP5.59□□□□□ -1.51
HOXB3-213ENST00000552000 FFAR2O15552 330 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 RNASEH2AO75792 299 aaKnown RBP5.59□□□□□ -1.51
HOXB3-213ENST00000552000 DLDP09622 509 aaKnown RBP5.59□□□□□ -1.51
HOXB3-213ENST00000552000 FAM200BP0CF97 657 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 RALAP11233 206 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 PABPC1P11940 636 aaKnown RBP5.59□□□□□ -1.51
HOXB3-213ENST00000552000 HOXD9P28356 352 aaPredicted RBP5.59□□□□□ -1.51
HOXB3-213ENST00000552000 RBMS1P29558 406 aaKnown RBP5.59□□□□□ -1.51
HOXB3-213ENST00000552000 CCR5P51681 352 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 GP2P55259 537 aaKnown RBP5.59□□□□□ -1.51
HOXB3-213ENST00000552000 COG7P83436 770 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 TYRO3Q06418 890 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 EHHADHQ08426 723 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 ZNF211Q13398 564 aaPredicted RBP5.59□□□□□ -1.51
HOXB3-213ENST00000552000 ALCAMQ13740 583 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 CST6Q15828 149 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 SNRNP35Q16560 246 aaKnown RBP5.59□□□□□ -1.51
HOXB3-213ENST00000552000 ZNF699Q32M78 642 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 SLC45A4Q5BKX6 768 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 ZNF667Q5HYK9 610 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 C3orf38Q5JPI3 329 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 MBLAC2Q68D91 279 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 CCDC81Q6ZN84 652 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 TMC6Q7Z403 805 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 SCD5Q86SK9 330 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 ADIPOR2Q86V24 386 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 SLC9A9Q8IVB4 645 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 CPXM2Q8N436 756 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 C12orf29Q8N999 325 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 OR2T34Q8NGX1 318 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 SYAP1Q96A49 352 aaPredicted RBP5.59□□□□□ -1.51
HOXB3-213ENST00000552000 EPSTI1Q96J88 318 aa5.59□□□□□ -1.51
HOXB3-213ENST00000552000 HSH2DQ96JZ2 352 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms