RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 TRIM69Q86WT6 500 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 PPM1KQ8N3J5 372 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 ZNF843Q8N446 348 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 FAM131CQ96AQ9 280 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 LGMNQ99538 433 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 ST7Q9NRC1 585 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 ARHGAP20Q9P2F6 1191 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 SLC12A6Q9UHW9 1150 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 C1QTNF3-AMACRE9PGA6 284 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 SIGLEC6O43699 453 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 RNGTTO60942 597 aaKnown RBP14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 SDC3O75056 442 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 MT-CO3P00414 261 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 PDGFRAP16234 1089 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 PRCPP42785 496 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 ACADSBP45954 432 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 FMO5P49326 533 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 PCBP4P57723 403 aaKnown RBP14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 CFHR1Q03591 330 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 LRRC63Q05C16 580 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 ZC3H12AQ5D1E8 599 aaKnown RBP14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 RABGAP1LQ5R372 815 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 BROXQ5VW32 411 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 ANKRD40Q6AI12 368 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 KDM7AQ6ZMT4 941 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 ERICH1Q86X53 443 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 SPACA3Q8IXA5 215 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 ATP6V0D2Q8N8Y2 350 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 ZNF248Q8NDW4 579 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 KLHDC7BQ96G42 594 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 ZSWIM1Q9BR11 485 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 SCAND2PQ9GZW5 306 aaPredicted RBP14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 METTL14Q9HCE5 456 aaKnown RBP14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 SLC25A13Q9UJS0 675 aa14.62□□□□□ -0.07
CHMP1A-210ENST00000551981 DOCK9Q9BZ29 2069 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 A0A1B0GVM2 712 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 TCAF2A6NFQ2 919 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 RNF225M0QZC1 329 aaPredicted RBP14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 ERVH48-1M5A8F1 160 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 TRIM38O00635 465 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 ALOX15BO15296 676 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 VAV1P15498 845 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 ZNF18P17022 549 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 VASPP50552 380 aaPredicted RBP14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 PLK1P53350 603 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 UCNP55089 124 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 CNTN1Q12860 1018 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 ACCSLQ4AC99 568 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 COBLL1Q53SF7 1204 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 ZNF658Q5TYW1 1059 aaPredicted RBP14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 SYPL2Q5VXT5 272 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 LSMEM2Q8N112 164 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 CCAR2Q8N163 923 aaKnown RBP14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 FRS2Q8WU20 508 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 ZNF578Q96N58 590 aaPredicted RBP14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 GTPBP4Q9BZE4 634 aaKnown RBP14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 GOLPH3LQ9H4A5 285 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 POPDC2Q9HBU9 364 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 PREBQ9HCU5 417 aa14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 XPO7Q9UIA9 1087 aaKnown RBP14.61□□□□□ -0.07
CHMP1A-210ENST00000551981 MAST4O15021 2626 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 KCNU1A8MYU2 1149 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 PMM2O15305 246 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 TRUB2O95900 331 aaKnown RBP14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 THEGLP0DJG4 465 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 ALPPL2P10696 532 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 SLC2A3P11169 496 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 RPL34P49207 117 aaKnown RBP14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 NUMBP49757 651 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 METAP1P53582 386 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 TMPRSS3P57727 454 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 CCDC15Q0P6D6 951 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 KCNH2Q12809 1159 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 PNOCQ13519 176 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 TAF1BQ53T94 588 aaPredicted RBP14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 AGBL4Q5VU57 503 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 SLC25A45Q8N413 288 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 OR4C6Q8NH72 309 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 ERCC4Q92889 916 aaPredicted RBP14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 RNF34Q969K3 372 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 DEPDC7Q96QD5 511 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 MED15Q96RN5 788 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 FAM204AQ9H8W3 233 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 EVA1BQ9NVM1 165 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 SARDHQ9UL12 918 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 PPM1HQ9ULR3 514 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 ATP6V1DQ9Y5K8 247 aa14.6□□□□□ -0.07
CHMP1A-210ENST00000551981 MCF2LO15068 1137 aa14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 ATP9BO43861 1147 aa14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 SMC2O95347 1197 aa14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 CALCAP01258 141 aa14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 DGKAP23743 735 aa14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 GPD2P43304 727 aa14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 YWHAZP63104 245 aaKnown RBP14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 RHDQ02161 417 aa14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 GCNT1Q02742 428 aa14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 KCNMA1Q12791 1236 aa14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 STIM1Q13586 685 aa14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 MEA1Q16626 185 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms