RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 FAM72AQ5TYM5 149 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 FAM72DQ6L9T8 149 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 CXorf57Q6NSI4 855 aaKnown RBP10.91□□□□□ -0.66
PTCH1-225ENST00000551845 ZNF783Q6ZMS7 281 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 TFAP2DQ7Z6R9 452 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 FAM72BQ86X60 149 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 PYROXD2Q8N2H3 581 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 NIPA2Q8N8Q9 360 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 KDM1BQ8NB78 822 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 ZBTB44Q8NCP5 570 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 CYB5D2Q8WUJ1 264 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 BTBD6Q96KE9 485 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 HHIPQ96QV1 700 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 EPC1Q9H2F5 836 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 DHX35Q9H5Z1 703 aaKnown RBP10.91□□□□□ -0.66
PTCH1-225ENST00000551845 BCCIPQ9P287 314 aaKnown RBP eCLIP10.91□□□□□ -0.66
PTCH1-225ENST00000551845 VPS28Q9UK41 221 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 INTS6Q9UL03 887 aaKnown RBP10.91□□□□□ -0.66
PTCH1-225ENST00000551845 ERVW-1Q9UQF0 538 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 PCDHA13Q9Y5I0 950 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 TICRRQ7Z2Z1 1910 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 MYO16Q9Y6X6 1858 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 WDR87Q6ZQQ6 2873 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 TPRP12270 2363 aaKnown RBP10.9□□□□□ -0.66
PTCH1-225ENST00000551845 TCRBV21S2A2A0A5A6 115 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 PROSCO94903 275 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 NDUFA10O95299 355 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 CHRM1P11229 460 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-225ENST00000551845 HTR7P34969 479 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 ETFBP38117 255 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 NOP2P46087 812 aaKnown RBP10.9□□□□□ -0.66
PTCH1-225ENST00000551845 MAPKAPK2P49137 400 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 GSDMDP57764 484 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 SPEM2Q0P670 501 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 BYSLQ13895 437 aaKnown RBP10.9□□□□□ -0.66
PTCH1-225ENST00000551845 PTPRNQ16849 979 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 USP39Q53GS9 565 aaKnown RBP10.9□□□□□ -0.66
PTCH1-225ENST00000551845 MANEALQ5VSG8 457 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 ANO7Q6IWH7 933 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 WDR5BQ86VZ2 330 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 NETO1Q8TDF5 533 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 ALG14Q96F25 216 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 SPON2Q9BUD6 331 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 C2orf49Q9BVC5 232 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-225ENST00000551845 TMEM245Q9H330 911 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 ZWILCHQ9H900 591 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 GRPEL1Q9HAV7 217 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 PARD6AQ9NPB6 346 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 OSGEPQ9NPF4 335 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 TMEM248Q9NWD8 314 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 AP4E1Q9UPM8 1137 aa10.9□□□□□ -0.66
PTCH1-225ENST00000551845 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.9□□□□□ -0.66
PTCH1-225ENST00000551845 ACACBO00763 2458 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 A0A0D9SEW6 157 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-225ENST00000551845 A0A1W2PQF6 199 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 SOWAHDA6NJG2 315 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 EEF2KO00418 725 aaKnown RBP10.89□□□□□ -0.67
PTCH1-225ENST00000551845 SLC30A4O14863 429 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 FGF10O15520 208 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-225ENST00000551845 LILRB5O75023 590 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 RARAP10276 462 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 TGM1P22735 817 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 FECHP22830 423 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 HCAR3P49019 387 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 TPI1P60174 286 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 GNA12Q03113 381 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 SLC20A2Q08357 652 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 MESDQ14696 234 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 TCEAL1Q15170 157 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 LPAL2Q16609 132 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 ACCSLQ4AC99 568 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 PPP6R3Q5H9R7 873 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-225ENST00000551845 KCNT1Q5JUK3 1230 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 IL31Q6EBC2 164 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 RETSATQ6NUM9 610 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 NLRP14Q86W24 1093 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 RASSF3Q86WH2 238 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 OR52K2Q8NGK3 314 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 HMGB4Q8WW32 186 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 HSPH1Q92598 858 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 RPL10LQ96L21 214 aaKnown RBP10.89□□□□□ -0.67
PTCH1-225ENST00000551845 SNRNP25Q9BV90 132 aaKnown RBP10.89□□□□□ -0.67
PTCH1-225ENST00000551845 MAGEH1Q9H213 219 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 GPATCH2LQ9NWQ4 482 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 DNAI1Q9UI46 699 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 SLCO3A1Q9UIG8 710 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 SLC25A13Q9UJS0 675 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 HPCAL4Q9UM19 191 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 OR51B4Q9Y5P0 310 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 RAD54BQ9Y620 910 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 COL4A2P08572 1712 aa10.89□□□□□ -0.67
PTCH1-225ENST00000551845 TARSL2A2RTX5 802 aaKnown RBP10.88□□□□□ -0.67
PTCH1-225ENST00000551845 TMEM110-MUSTN1A8MSY1 372 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 WASH4PA8MWX3 477 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 CBX4O00257 560 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 HRO43593 1189 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 RAMP2O60895 175 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 ZNF217O75362 1048 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 MTA2O94776 668 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms