RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 FYNP06241 537 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 IGHV4-34P06331 123 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 BRD2P25440 801 aaKnown RBP7.89□□□□□ -1.15
NEK3-201ENST00000550331 CSKP41240 450 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 CTSKP43235 329 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 GPD2P43304 727 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 ACADSBP45954 432 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 RPS24P62847 133 aaKnown RBP7.89□□□□□ -1.15
NEK3-201ENST00000550331 RACK1P63244 317 aaKnown RBP7.89□□□□□ -1.15
NEK3-201ENST00000550331 CYP4F3Q08477 520 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 CST6Q15828 149 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 INAVAQ3KP66 663 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 MS4A13Q5J8X5 152 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 KIAA0895LQ68EN5 471 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 NADSYN1Q6IA69 706 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 TTI2Q6NXR4 508 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 TRIM59Q8IWR1 403 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 GALNT15Q8N3T1 639 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 DQX1Q8TE96 717 aaKnown RBP7.89□□□□□ -1.15
NEK3-201ENST00000550331 CLEC4CQ8WTT0 213 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 STK32AQ8WU08 396 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 ERCC4Q92889 916 aaPredicted RBP7.89□□□□□ -1.15
NEK3-201ENST00000550331 KAT5Q92993 513 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 SLC39A13Q96H72 371 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 MRGPRX3Q96LB0 322 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 ORAI3Q9BRQ5 295 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 ACE2Q9BYF1 805 aaPredicted RBP7.89□□□□□ -1.15
NEK3-201ENST00000550331 MIS12Q9H081 205 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 NUCKS1Q9H1E3 243 aaKnown RBP7.89□□□□□ -1.15
NEK3-201ENST00000550331 STIM2Q9P246 746 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 DKK4Q9UBT3 224 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 MAN1B1Q9UKM7 699 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 FZD4Q9ULV1 537 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 TPX2Q9ULW0 747 aaKnown RBP7.89□□□□□ -1.15
NEK3-201ENST00000550331 CNTN6Q9UQ52 1028 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 SLCO1B1Q9Y6L6 691 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 TENM4Q6N022 2769 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 PTPRQQ9UMZ3 2332 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 TMEM131Q92545 1883 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 A0A1W2PPC4 97 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 BICDL2A1A5D9 508 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 TARSL2A2RTX5 802 aaKnown RBP7.88□□□□□ -1.15
NEK3-201ENST00000550331 LRRC72A6NJI9 287 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 C10orf142B7Z368 130 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 MED7O43513 233 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 SIN3BO75182 1162 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 C1QL1O75973 258 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 MOCS3O95396 460 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 APOEP02649 317 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 SRPRAP08240 638 aaKnown RBP7.88□□□□□ -1.15
NEK3-201ENST00000550331 ATXN1LP0C7T5 689 aaKnown RBP7.88□□□□□ -1.15
NEK3-201ENST00000550331 PLA2G2AP14555 144 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 ABCG1P45844 678 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 NUCB2P80303 420 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 PITRM1Q5JRX3 1037 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 C9orf64Q5T6V5 341 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 TTC39BQ5VTQ0 682 aaPredicted RBP7.88□□□□□ -1.15
NEK3-201ENST00000550331 RRAGAQ7L523 313 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 ENOSF1Q7L5Y1 443 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 ADAT2Q7Z6V5 191 aaKnown RBP7.88□□□□□ -1.15
NEK3-201ENST00000550331 TAC4Q86UU9 113 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 MARCH9Q86YJ5 346 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 ARHGEF19Q8IW93 802 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 DHX40Q8IX18 779 aaKnown RBP7.88□□□□□ -1.15
NEK3-201ENST00000550331 CARNMT1Q8N4J0 409 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 PIP4K2CQ8TBX8 421 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 SKA1Q96BD8 255 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 FAM149B1Q96BN6 582 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 BTN2A3PQ96KV6 586 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 KREMEN1Q96MU8 473 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 KRTAP4-7Q9BYR0 210 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 MTG2Q9H4K7 406 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 ST7Q9NRC1 585 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 FBXL12Q9NXK8 326 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 ADAMTS1Q9UHI8 967 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 INTS6Q9UL03 887 aaKnown RBP7.88□□□□□ -1.15
NEK3-201ENST00000550331 ERVW-1Q9UQF0 538 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 NAALADL1Q9UQQ1 740 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 BTBD3Q9Y2F9 522 aa7.88□□□□□ -1.15
NEK3-201ENST00000550331 CFAP46Q8IYW2 2715 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 A0A087WV48 116 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 A0A1B0GTQ1 180 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 EDDM13A0A1B0GTR0 161 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 A0A1W2PP55 124 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 TRABD2BA6NFA1 517 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 CYSRT1A8MQ03 144 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 E9PAM4 449 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 H0Y8X5 98 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 CAPN9O14815 690 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 MID1O15344 667 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 SPINT1O43278 529 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 RNASEH2AO75792 299 aaKnown RBP7.87□□□□□ -1.15
NEK3-201ENST00000550331 MOCS2O96007 188 aaPredicted RBP7.87□□□□□ -1.15
NEK3-201ENST00000550331 CALCAP01258 141 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 IGLV3-25P01717 112 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 AFPP02771 609 aaKnown RBP7.87□□□□□ -1.15
NEK3-201ENST00000550331 C5AR1P21730 350 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 SLC8A1P32418 973 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 CCR5P51681 352 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 GALCP54803 685 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms