RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 NIF3L1Q9GZT8 377 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 DGKBQ9Y6T7 804 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 SYNJ2BP-COX16A0A087WUM0 186 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 A0A096LPK6 155 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 HTRA2O43464 458 aaPredicted RBP12.35□□□□□ -0.43
VDR-208ENST00000550325 TRIM13O60858 407 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 BCAS2O75934 225 aaPredicted RBP12.35□□□□□ -0.43
VDR-208ENST00000550325 C1QAP02745 245 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 SERPINB2P05120 415 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 GRIA3P42263 894 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 PFKPQ01813 784 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 PMS2P3Q13401 168 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 ZBED5Q49AG3 693 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 B3GNT9Q6UX72 402 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 STRA8Q7Z7C7 330 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 SNX29P2Q8IUI4 249 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 PDZD8Q8NEN9 1154 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 CNDP1Q96KN2 507 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 HEXIM2Q96MH2 286 aaKnown RBP12.35□□□□□ -0.43
VDR-208ENST00000550325 CGRRF1Q99675 332 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 HNRNPABQ99729 332 aaKnown RBP12.35□□□□□ -0.43
VDR-208ENST00000550325 SLC39A3Q9BRY0 314 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 GATA5Q9BWX5 397 aaPredicted RBP12.35□□□□□ -0.43
VDR-208ENST00000550325 MRPL46Q9H2W6 279 aaKnown RBP12.35□□□□□ -0.43
VDR-208ENST00000550325 HIPK3Q9H422 1215 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 SOX17Q9H6I2 414 aaPredicted RBP12.35□□□□□ -0.43
VDR-208ENST00000550325 COX16Q9P0S2 106 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 PCDHB12Q9Y5F1 795 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 PRSS51A0A1B0GVH4 220 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 TMEM233B4DJY2 109 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 NRP1O14786 923 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 ENTPD3O75355 529 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 ARSAP15289 507 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 ALDH3B2P48448 385 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 BMXP51813 675 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 GBE1Q04446 702 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 ZC3H7AQ8IWR0 971 aaKnown RBP12.35□□□□□ -0.43
VDR-208ENST00000550325 SLC15A4Q8N697 577 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 CCDC68Q9H2F9 335 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 FAM49BQ9NUQ9 324 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 SLC39A10Q9ULF5 831 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 PCDHA10Q9Y5I2 948 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 ST14Q9Y5Y6 855 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 E7ENX8 843 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 ZNF195O14628 629 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 PPEF1O14829 653 aaPredicted RBP12.35□□□□□ -0.43
VDR-208ENST00000550325 BBOX1O75936 387 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 LDHAP00338 332 aaKnown RBP12.35□□□□□ -0.43
VDR-208ENST00000550325 CTBSQ01459 385 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 TSPY1Q01534 308 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 BFSP2Q13515 415 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 ZNF362Q5T0B9 420 aaPredicted RBP12.35□□□□□ -0.43
VDR-208ENST00000550325 PQLC3Q8N755 202 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 DNAAF3Q8N9W5 541 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 BPIFB6Q8NFQ5 453 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 APBB2Q92870 758 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 ACO2Q99798 780 aaKnown RBP12.35□□□□□ -0.43
VDR-208ENST00000550325 MAGEB5Q9BZ81 275 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 GLIS2Q9BZE0 524 aaPredicted RBP12.35□□□□□ -0.43
VDR-208ENST00000550325 VPS45Q9NRW7 570 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 AP4E1Q9UPM8 1137 aa12.35□□□□□ -0.43
VDR-208ENST00000550325 SCAF8Q9UPN6 1271 aaKnown RBP12.35□□□□□ -0.43
VDR-208ENST00000550325 ZBBXA8MT70 800 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 H3BMQ9 156 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 TK2O00142 265 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 TRIM38O00635 465 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 SOCS2O14508 198 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 GMNNO75496 209 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 ZBTB7AO95365 584 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 ZNF12P17014 697 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 PRDX6P30041 224 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 JAK3P52333 1124 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 MAPK11Q15759 364 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 FAM110BQ8TC76 370 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 ZNF669Q96BR6 464 aaPredicted RBP12.34□□□□□ -0.43
VDR-208ENST00000550325 MASTLQ96GX5 879 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 FBXL20Q96IG2 436 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 COG8Q96MW5 612 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 NEURL2Q9BR09 285 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 FRMD8Q9BZ67 464 aaPredicted RBP12.34□□□□□ -0.43
VDR-208ENST00000550325 HAPLN2Q9GZV7 340 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 UPF3AQ9H1J1 476 aaKnown RBP12.34□□□□□ -0.43
VDR-208ENST00000550325 ANKEF1Q9NU02 776 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 GMPR2Q9P2T1 348 aaKnown RBP12.34□□□□□ -0.43
VDR-208ENST00000550325 CNOT3O75175 753 aaKnown RBP12.34□□□□□ -0.43
VDR-208ENST00000550325 GPC4O75487 556 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 JUNP05412 331 aaKnown RBP12.34□□□□□ -0.43
VDR-208ENST00000550325 GRIA4P48058 902 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 IREB2P48200 963 aaKnown RBP12.34□□□□□ -0.43
VDR-208ENST00000550325 CA9Q16790 459 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 ARL13AQ5H913 290 aaPredicted RBP12.34□□□□□ -0.43
VDR-208ENST00000550325 C15orf52Q6ZUT6 534 aaKnown RBP12.34□□□□□ -0.43
VDR-208ENST00000550325 IFNEQ86WN2 208 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 SAMD3Q8N6K7 520 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 NIPA2Q8N8Q9 360 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 MCPH1Q8NEM0 835 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 CMASQ8NFW8 434 aaPredicted RBP12.34□□□□□ -0.43
VDR-208ENST00000550325 PBXIP1Q96AQ6 731 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 PADI4Q9UM07 663 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 CORINQ9Y5Q5 1042 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms