RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 ARHGAP8P85298 464 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 C1QBPQ07021 282 aaKnown RBP10.05□□□□□ -0.8
HDAC7-229ENST00000549883 ZNF252P-AS1Q0IIN9 211 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 PUM1Q14671 1186 aaKnown RBP eCLIP10.05□□□□□ -0.8
HDAC7-229ENST00000549883 TRIM61Q5EBN2 209 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 TTC39BQ5VTQ0 682 aaPredicted RBP10.05□□□□□ -0.8
HDAC7-229ENST00000549883 DNAJC24Q6P3W2 148 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 SLC36A4Q6YBV0 504 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 SYT12Q8IV01 421 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 MMAAQ8IVH4 418 aaKnown RBP10.05□□□□□ -0.8
HDAC7-229ENST00000549883 CCDC117Q8IWD4 279 aaPredicted RBP10.05□□□□□ -0.8
HDAC7-229ENST00000549883 DRC7Q8IY82 874 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 ARFGAP1Q8N6T3 406 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 NETO1Q8TDF5 533 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 HAPLN3Q96S86 360 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 EDEM2Q9BV94 578 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 XPO4Q9C0E2 1151 aaKnown RBP10.05□□□□□ -0.8
HDAC7-229ENST00000549883 MUC3BQ9H195 1237 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 C6orf106Q9H6K1 298 aaPredicted RBP10.05□□□□□ -0.8
HDAC7-229ENST00000549883 SUN2Q9UH99 717 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 VPS28Q9UK41 221 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 DNAH14Q0VDD8 3507 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 EDDM13A0A1B0GTR0 161 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 KHNYNO15037 678 aaKnown RBP10.04□□□□□ -0.8
HDAC7-229ENST00000549883 MID1O15344 667 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 LRIG2O94898 1065 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 FTLP02792 175 aaPredicted RBP10.04□□□□□ -0.8
HDAC7-229ENST00000549883 CFIP05156 583 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 RHOCP08134 193 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 ACADMP11310 421 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 ACVRL1P37023 503 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 PSMD8P48556 350 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 KLHL30Q0D2K2 578 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 MAMLD1Q13495 774 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 SLC12A1Q13621 1099 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 ARID5BQ14865 1188 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 DLG2Q15700 870 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 POM121L1PQ3SYA9 428 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 DCAF12L1Q5VU92 463 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 DAB2IPQ5VWQ8 1189 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 PEAR1Q5VY43 1037 aaPredicted RBP10.04□□□□□ -0.8
HDAC7-229ENST00000549883 ZNF776Q68DI1 518 aaPredicted RBP10.04□□□□□ -0.8
HDAC7-229ENST00000549883 SCYL2Q6P3W7 929 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 Q6ZVU0 165 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 STRADAQ7RTN6 431 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 DGLUCYQ7Z3D6 616 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 AADATQ8N5Z0 425 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 ZNF557Q8N988 423 aaPredicted RBP10.04□□□□□ -0.8
HDAC7-229ENST00000549883 RNF214Q8ND24 703 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 NEUROG2Q9H2A3 272 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 PABPC3Q9H361 631 aaKnown RBP10.04□□□□□ -0.8
HDAC7-229ENST00000549883 GPATCH2LQ9NWQ4 482 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 OR12D3Q9UGF7 316 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 VPS51Q9UID3 782 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 SARDHQ9UL12 918 aa10.04□□□□□ -0.8
HDAC7-229ENST00000549883 PCNX2A6NKB5 2137 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 A0A1W2PP55 124 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 TARSL2A2RTX5 802 aaKnown RBP10.03□□□□□ -0.8
HDAC7-229ENST00000549883 METTL12A8MUP2 240 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 GOLGA6L19H0YKK7 550 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 ATP9BO43861 1147 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 BNIP3LO60238 219 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 ZNF821O75541 412 aaPredicted RBP10.03□□□□□ -0.8
HDAC7-229ENST00000549883 ZMPSTE24O75844 475 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 CD160O95971 181 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 GYPCP04921 128 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 CCDC172P0C7W6 258 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 SRCP12931 536 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 ENGP17813 658 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 PTMSP20962 102 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 OR1E1P30953 314 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 SLC8A1P32418 973 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 MAPK8P45983 427 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 ZNF143P52747 638 aaPredicted RBP10.03□□□□□ -0.8
HDAC7-229ENST00000549883 TPM4P67936 248 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 BNC1Q01954 994 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 NFKBIBQ15653 356 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 CST6Q15828 149 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 CA9Q16790 459 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 SKOR2Q2VWA4 1001 aaPredicted RBP10.03□□□□□ -0.8
HDAC7-229ENST00000549883 ACCSLQ4AC99 568 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 FIGNQ5HY92 759 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 SPDYCQ5MJ68 293 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 PLEKHA7Q6IQ23 1121 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 RWDD4Q6NW29 188 aaKnown RBP10.03□□□□□ -0.8
HDAC7-229ENST00000549883 SLC23A3Q6PIS1 610 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 LAYNQ6UX15 382 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 LRRC31Q6UY01 552 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 LEKR1Q6ZMV7 388 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 NLRP14Q86W24 1093 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 RGL4Q8IZJ4 473 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 ZCCHC9Q8N567 271 aaKnown RBP10.03□□□□□ -0.8
HDAC7-229ENST00000549883 SH2D3CQ8N5H7 860 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 KDM1BQ8NB78 822 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 NETO2Q8NC67 525 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 C1orf216Q8TAB5 229 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 PEBP4Q96S96 227 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 RTKNQ9BST9 563 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 SPON2Q9BUD6 331 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 NUP58Q9BVL2 599 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms