RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 TRIM49D1C9J1S8 452 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 SNRPAP09012 282 aaKnown RBP19.55■□□□□ 0.72
BRF1-215ENST00000549655 RHOQP17081 205 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 FOXN2P32314 431 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 LGSNQ5TDP6 509 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 TFAP2DQ7Z6R9 452 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 PIGWQ7Z7B1 504 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 UNC5BQ8IZJ1 945 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.55■□□□□ 0.72
BRF1-215ENST00000549655 TTC17Q96AE7 1141 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 ZNF689Q96CS4 500 aaPredicted RBP19.55■□□□□ 0.72
BRF1-215ENST00000549655 ZNF419Q96HQ0 510 aaPredicted RBP19.55■□□□□ 0.72
BRF1-215ENST00000549655 ELAC2Q9BQ52 826 aaKnown RBP19.55■□□□□ 0.72
BRF1-215ENST00000549655 NOL6Q9H6R4 1146 aaKnown RBP19.55■□□□□ 0.72
BRF1-215ENST00000549655 BFARQ9NZS9 450 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 SAMD15Q9P1V8 674 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 FNIP2Q9P278 1114 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 DOCK4Q8N1I0 1966 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 NYNRINQ9P2P1 1898 aaKnown RBP19.55■□□□□ 0.72
BRF1-215ENST00000549655 CACNG3O60359 315 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 SOD2P04179 222 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 DEFB103AP81534 67 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 RING1Q06587 406 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 LRRC26Q2I0M4 334 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 RAP1GAP2Q684P5 730 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 TIGD7Q6NT04 549 aaPredicted RBP19.55■□□□□ 0.72
BRF1-215ENST00000549655 FBXL22Q6P050 247 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 SH2D5Q6ZV89 423 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 LRRC49Q8IUZ0 686 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 CEP295NLQ96MC4 621 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 ZNF558Q96NG5 402 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 IL12RB2Q99665 862 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 LRRC40Q9H9A6 602 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 AFF4Q9UHB7 1163 aaKnown RBP19.55■□□□□ 0.72
BRF1-215ENST00000549655 GRID1Q9ULK0 1009 aa19.55■□□□□ 0.72
BRF1-215ENST00000549655 RRP15Q9Y3B9 282 aaKnown RBP19.55■□□□□ 0.72
BRF1-215ENST00000549655 IGLV3-10A0A075B6K4 115 aa19.54■□□□□ 0.72
BRF1-215ENST00000549655 CNTN5O94779 1100 aa19.54■□□□□ 0.72
BRF1-215ENST00000549655 SEC24AO95486 1093 aa19.54■□□□□ 0.72
BRF1-215ENST00000549655 POLBP06746 335 aa19.54■□□□□ 0.72
BRF1-215ENST00000549655 PYGBP11216 843 aa19.54■□□□□ 0.72
BRF1-215ENST00000549655 TAC1P20366 129 aa19.54■□□□□ 0.72
BRF1-215ENST00000549655 ITGB8P26012 769 aa19.54■□□□□ 0.72
BRF1-215ENST00000549655 ALFQ53S48 1182 aa19.54■□□□□ 0.72
BRF1-215ENST00000549655 HHATQ5VTY9 493 aa19.54■□□□□ 0.72
BRF1-215ENST00000549655 LVRNQ6Q4G3 990 aa19.54■□□□□ 0.72
BRF1-215ENST00000549655 SRLQ86TD4 932 aa19.54■□□□□ 0.72
BRF1-215ENST00000549655 UMODL1-AS1Q8N2C9 162 aa19.54■□□□□ 0.72
BRF1-215ENST00000549655 TCP10LQ8TDR4 215 aa19.54■□□□□ 0.72
BRF1-215ENST00000549655 CABS1Q96KC9 395 aa19.54■□□□□ 0.72
BRF1-215ENST00000549655 APOL2Q9BQE5 337 aa19.54■□□□□ 0.72
BRF1-215ENST00000549655 TMEM248Q9NWD8 314 aa19.54■□□□□ 0.72
BRF1-215ENST00000549655 PSMD3O43242 534 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 KRT38O76015 456 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 CSF2RAP15509 400 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 SLC18A2Q05940 514 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 SF3A3Q12874 501 aaKnown RBP eCLIP19.53■□□□□ 0.722e-6■■■■■ 42.3
BRF1-215ENST00000549655 IFT88Q13099 833 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 SEPT7Q16181 437 aaKnown RBP19.53■□□□□ 0.72
BRF1-215ENST00000549655 C6orf89Q6UWU4 347 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 CES3Q6UWW8 571 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 SLC39A11Q8N1S5 342 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 ZNF461Q8TAF7 563 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 IGSF8Q969P0 613 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 TMEM169Q96HH4 297 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 PAWRQ96IZ0 340 aaKnown RBP19.53■□□□□ 0.72
BRF1-215ENST00000549655 ZNF512Q96ME7 567 aaPredicted RBP19.53■□□□□ 0.72
BRF1-215ENST00000549655 GLOD4Q9HC38 313 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 IPO11Q9UI26 975 aaKnown RBP19.53■□□□□ 0.72
BRF1-215ENST00000549655 RPS6KL1Q9Y6S9 549 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 LTBP2Q14767 1821 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 ANKRD65E5RJM6 399 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 TM9SF1O15321 606 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 LPXNO60711 386 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 GJA8P48165 433 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 KPNA1P52294 538 aaPredicted RBP19.53■□□□□ 0.72
BRF1-215ENST00000549655 NDST2P52849 883 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 DSG1Q02413 1049 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 NIPAL4Q0D2K0 466 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 BMPR2Q13873 1038 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 ZKSCAN8Q15776 578 aaPredicted RBP19.53■□□□□ 0.72
BRF1-215ENST00000549655 NAPEPLDQ6IQ20 393 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 KLHDC8BQ8IXV7 354 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 CCDC197Q8NCU1 140 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 SPATA22Q8NHS9 363 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 CDKL2Q92772 493 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 APOPT1Q96IL0 206 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 FCRL5Q96RD9 977 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 CDK5RAP1Q96SZ6 601 aaKnown RBP19.53■□□□□ 0.72
BRF1-215ENST00000549655 C11orf49Q9H6J7 331 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 RBM22Q9NW64 420 aaKnown RBP eCLIP19.53■□□□□ 0.72
BRF1-215ENST00000549655 DONSONQ9NYP3 566 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 SLC17A7Q9P2U7 560 aa19.53■□□□□ 0.72
BRF1-215ENST00000549655 AAR2Q9Y312 384 aaKnown RBP19.53■□□□□ 0.72
BRF1-215ENST00000549655 ABLIM3O94929 683 aa19.52■□□□□ 0.72
BRF1-215ENST00000549655 TIMP1P01033 207 aa19.52■□□□□ 0.72
BRF1-215ENST00000549655 SERPINB9P50453 376 aa19.52■□□□□ 0.72
BRF1-215ENST00000549655 PDK4Q16654 411 aa19.52■□□□□ 0.72
BRF1-215ENST00000549655 SPANXN3Q5MJ09 141 aa19.52■□□□□ 0.72
BRF1-215ENST00000549655 CERCAMQ5T4B2 595 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms