RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 CDK18Q07002 472 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 ANKRD20A4Q4UJ75 823 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 LIN52Q52LA3 116 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 SLC27A1Q6PCB7 646 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 STRADAQ7RTN6 431 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 PRRT2Q7Z6L0 340 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 KCNMB4Q86W47 210 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 MFN1Q8IWA4 741 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 GALNT4Q8N4A0 578 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 FAM156AQ8NDB6 213 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 SREK1Q8WXA9 508 aaKnown RBP12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 EDEM1Q92611 657 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 NMD3Q96D46 503 aaKnown RBP12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 OMDQ99983 421 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 SIKE1Q9BRV8 207 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 CENPKQ9BS16 269 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 C16orf70Q9BSU1 422 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 TLK1Q9UKI8 766 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 DTNAQ9Y4J8 743 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 PCDHB12Q9Y5F1 795 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 SHROOM3Q8TF72 1996 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 UQCRBP14927 111 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 NFKB1P19838 968 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 PTPN3P26045 913 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 HARS2P49590 506 aaKnown RBP12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 CDK7P50613 346 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 USP10Q14694 798 aaKnown RBP12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 SPANXN3Q5MJ09 141 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 ARHGAP17Q68EM7 881 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 SATL1Q86VE3 508 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 UNC93AQ86WB7 457 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 APLFQ8IW19 511 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 TMA16Q96EY4 203 aaKnown RBP12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 VPS39Q96JC1 886 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 TSNARE1Q96NA8 513 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 NAT9Q9BTE0 207 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 CLIC5Q9NZA1 410 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 SF3B1O75533 1304 aaKnown RBP eCLIP12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 MYOCOSA0A1B0GUC4 107 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 ASB14A6NK59 587 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 JCHAINP01591 159 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 ATP6V1B1P15313 513 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 PIK3R1P27986 724 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 NMBRP28336 390 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 GRIA4P48058 902 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 RAB27AP51159 221 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 TKTL1P51854 596 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 LIMK2P53671 638 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 FOLH1Q04609 750 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 SOX4Q06945 474 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 ITGA7Q13683 1181 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 GRM3Q14832 879 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 PDK3Q15120 406 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 CCDC153Q494R4 210 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 PGM2L1Q6PCE3 622 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 ACAD11Q709F0 780 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 PTAR1Q7Z6K3 402 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 PSTKQ8IV42 348 aaKnown RBP12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 KCTD4Q8WVF5 259 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 RCN3Q96D15 328 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 ILKAPQ9H0C8 392 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 VCX3BQ9H321 246 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 ANLNQ9NQW6 1124 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 STAP1Q9ULZ2 295 aa12.17□□□□□ -0.46
RAPGEF3-219ENST00000549151 SMIM28A0A1B0GU29 152 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 G3V2L1 256 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 NRP1O14786 923 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 STAU1O95793 577 aaKnown RBP12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 ATP5BP06576 529 aaKnown RBP12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 NCAM1P13591 858 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 ACADSBP45954 432 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 ALDH1A3P47895 512 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 FLOT2Q14254 428 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 LSM12Q3MHD2 195 aaKnown RBP12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 DCAF4L1Q3SXM0 396 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 MARCH8Q5T0T0 291 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 STXBP5Q5T5C0 1151 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 FBXL19Q6PCT2 694 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 EPGNQ6UW88 154 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 OSTM1Q86WC4 334 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 ERO1BQ86YB8 467 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 NT5DC4Q86YG4 428 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 NPWQ8N729 165 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 B3GALNT2Q8NCR0 500 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 PIP4K2CQ8TBX8 421 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 KCNK16Q96T55 309 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 ACE2Q9BYF1 805 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 STN1Q9H668 368 aaKnown RBP12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 COPS7BQ9H9Q2 264 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 DDIT4Q9NX09 232 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 APPL1Q9UKG1 709 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 TMEM233B4DJY2 109 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 JUNP05412 331 aaKnown RBP12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 SRGAP2BP0DMP2 458 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 XRCC1P18887 633 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 GRIA2P42262 883 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 GLUD2P49448 558 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 THOP1P52888 689 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 ZBTB17Q13105 803 aa12.16□□□□□ -0.46
RAPGEF3-219ENST00000549151 INSCQ1MX18 579 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms