RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 HACE1Q8IYU2 909 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 PYROXD2Q8N2H3 581 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 CCDC185Q8N715 623 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 KLHL23Q8NBE8 558 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 FAM156AQ8NDB6 213 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 CLEC4CQ8WTT0 213 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 CNDP1Q96KN2 507 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 RBBP8Q99708 897 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 SLC4A5Q9BY07 1137 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 TRIP11Q15643 1979 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 A0A096LPK6 155 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 ZBTB42B2RXF5 422 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 TMEM114B3SHH9 223 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 MATN2O00339 956 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 TRIM13O60858 407 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 ZFXP17010 805 aaPredicted RBP14.01□□□□□ -0.17
HDAC7-228ENST00000548938 GOT1P17174 413 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 TCN1P20061 433 aaPredicted RBP14.01□□□□□ -0.17
HDAC7-228ENST00000548938 ADARP55265 1226 aaKnown RBP14.01□□□□□ -0.17
HDAC7-228ENST00000548938 INCA1Q0VD86 236 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 DCTN2Q13561 401 aaKnown RBP14.01□□□□□ -0.17
HDAC7-228ENST00000548938 STRA8Q7Z7C7 330 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 TMEM102Q8N9M5 508 aaPredicted RBP14.01□□□□□ -0.17
HDAC7-228ENST00000548938 ABTB1Q969K4 478 aaPredicted RBP14.01□□□□□ -0.17
HDAC7-228ENST00000548938 AGAP3Q96P47 875 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 CPNE1Q99829 537 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 NUF2Q9BZD4 464 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 C2orf40Q9H1Z8 148 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 FZD8Q9H461 694 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 WDR41Q9HAD4 459 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 SEPT10Q9P0V9 454 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 CSADQ9Y600 493 aa14.01□□□□□ -0.17
HDAC7-228ENST00000548938 ZNF487B1APH4 448 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 MFSD11O43934 449 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 PEX10O60683 326 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 RNASEH2AO75792 299 aaKnown RBP14□□□□□ -0.17
HDAC7-228ENST00000548938 IQCF3P0C7M6 154 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 STAG3L1P0CL83 205 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 IMPDH2P12268 514 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 NELFEP18615 380 aaKnown RBP14□□□□□ -0.17
HDAC7-228ENST00000548938 CREB5Q02930 508 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 TMED1Q13445 227 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 NRF1Q16656 503 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 GRTP1Q5TC63 336 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 SMYD5Q6GMV2 418 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 FSTL4Q6MZW2 842 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 BORAQ6PGQ7 559 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 PGAM4Q8N0Y7 254 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 ACVR1CQ8NER5 493 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 RP9Q8TA86 221 aaKnown RBP14□□□□□ -0.17
HDAC7-228ENST00000548938 DDI1Q8WTU0 396 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 PDCD6IPQ8WUM4 868 aaKnown RBP14□□□□□ -0.17
HDAC7-228ENST00000548938 ISL2Q96A47 359 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 AGAP2Q99490 1192 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 HEMK1Q9Y5R4 338 aaPredicted RBP14□□□□□ -0.17
HDAC7-228ENST00000548938 KPNA7A9QM74 516 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 MAGEB3O15480 346 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 JUNP05412 331 aaKnown RBP14□□□□□ -0.17
HDAC7-228ENST00000548938 POLBP06746 335 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 ME2P23368 584 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 HSPA13P48723 471 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 ITGA7Q13683 1181 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 SEL1L3Q68CR1 1132 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 DUS1LQ6P1R4 473 aaKnown RBP14□□□□□ -0.17
HDAC7-228ENST00000548938 MOB2Q70IA6 237 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 NLRP7Q8WX94 980 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 ZNF669Q96BR6 464 aaPredicted RBP14□□□□□ -0.17
HDAC7-228ENST00000548938 ZNF512Q96ME7 567 aaPredicted RBP14□□□□□ -0.17
HDAC7-228ENST00000548938 NT5C1AQ9BXI3 368 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 ILKAPQ9H0C8 392 aaPredicted RBP14□□□□□ -0.17
HDAC7-228ENST00000548938 LIN28AQ9H9Z2 209 aaKnown RBP14□□□□□ -0.17
HDAC7-228ENST00000548938 VPS28Q9UK41 221 aa14□□□□□ -0.17
HDAC7-228ENST00000548938 HDAC3O15379 428 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 USP12O75317 370 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 BCAS2O75934 225 aaPredicted RBP13.99□□□□□ -0.17
HDAC7-228ENST00000548938 PPARGP37231 505 aaPredicted RBP13.99□□□□□ -0.17
HDAC7-228ENST00000548938 LIMK2P53671 638 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 COG7P83436 770 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 EEPD1Q7L9B9 569 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 PTAR1Q7Z6K3 402 aaPredicted RBP13.99□□□□□ -0.17
HDAC7-228ENST00000548938 CLEC14AQ86T13 490 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 CHERPQ8IWX8 916 aaKnown RBP13.99□□□□□ -0.17
HDAC7-228ENST00000548938 RBM12BQ8IXT5 1001 aaKnown RBP13.99□□□□□ -0.17
HDAC7-228ENST00000548938 ZSCAN18Q8TBC5 510 aaPredicted RBP13.99□□□□□ -0.17
HDAC7-228ENST00000548938 TMIGD2Q96BF3 282 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 P2RY11Q96G91 374 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 VRTNQ9H8Y1 702 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 NMRAL1Q9HBL8 299 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 RNF11Q9Y3C5 154 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 TK2O00142 265 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 ACOT8O14734 319 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 DESP17661 470 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 PSMC3P17980 439 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 ATICP31939 592 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 CLCN2P51788 898 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 CLCN3P51790 818 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 PGGT1BP53609 377 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 MBTD1Q05BQ5 628 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 ACOT1Q86TX2 421 aa13.99□□□□□ -0.17
HDAC7-228ENST00000548938 ALDH16A1Q8IZ83 802 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms