RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 TULP2O00295 520 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 MSI1O43347 362 aaKnown RBP8.77□□□□□ -1.01
TROAP-208ENST00000548817 ACSL4O60488 711 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 MAGEC1O60732 1142 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 FBXO21O94952 628 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 GJB6O95452 261 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 LTFP02788 710 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 WNT1P04628 370 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 PAEPP09466 180 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 NNMTP40261 264 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 RGS7P49802 495 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 DUSP3P51452 185 aaPredicted RBP8.77□□□□□ -1.01
TROAP-208ENST00000548817 CCR5P51681 352 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 DAOAP59103 153 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 DAB2P98082 770 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 OVGP1Q12889 678 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 CLN3Q13286 438 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 CDH18Q13634 790 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 ZCWPW2Q504Y3 356 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 HS1BP3Q53T59 392 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 PIK3R6Q5UE93 754 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 RFWD3Q6PCD5 774 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 TMEM270Q6UE05 265 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 LCLAT1Q6UWP7 414 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 ADIPOR2Q86V24 386 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 SCML4Q8N228 414 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 ARL14Q8N4G2 192 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 CARNMT1Q8N4J0 409 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 FIBINQ8TAL6 211 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 AZIN2Q96A70 460 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 NT5C1BQ96P26 610 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 PABPC3Q9H361 631 aaKnown RBP8.77□□□□□ -1.01
TROAP-208ENST00000548817 USP29Q9HBJ7 922 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 METTL14Q9HCE5 456 aaKnown RBP8.77□□□□□ -1.01
TROAP-208ENST00000548817 AASDHPPTQ9NRN7 309 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.77□□□□□ -1.01
TROAP-208ENST00000548817 SRPK3Q9UPE1 567 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 EDDM13A0A1B0GTR0 161 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 GOLGA6L7A0A1B0GV03 622 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 TARSL2A2RTX5 802 aaKnown RBP8.76□□□□□ -1.01
TROAP-208ENST00000548817 BLACEA4D250 179 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 C10orf142B7Z368 130 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 M0QYV0 167 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 O00370 1275 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 PIK3R2O00459 728 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 RIOK3O14730 519 aaKnown RBP8.76□□□□□ -1.01
TROAP-208ENST00000548817 SART1O43290 800 aaKnown RBP8.76□□□□□ -1.01
TROAP-208ENST00000548817 SIGLEC6O43699 453 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 RNASEH2AO75792 299 aaKnown RBP8.76□□□□□ -1.01
TROAP-208ENST00000548817 APOEP02649 317 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 CKMT1AP12532 417 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 CD70P32970 193 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 CSKP41240 450 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 MCCD1P59942 119 aaPredicted RBP8.76□□□□□ -1.01
TROAP-208ENST00000548817 BNIP3Q12983 259 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 CNGA2Q16280 664 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 ISXQ2M1V0 245 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 HNRNPA1L2Q32P51 320 aaKnown RBP8.76□□□□□ -1.01
TROAP-208ENST00000548817 CCDC40Q4G0X9 1142 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 CBWD6Q4V339 395 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 CBWD3Q5JTY5 395 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 CBWD5Q5RIA9 395 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 MSANTD2Q6P1R3 559 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 SND1Q7KZF4 910 aaKnown RBP eCLIP8.76□□□□□ -1.01
TROAP-208ENST00000548817 KIAA0907Q7Z7F0 614 aaPredicted RBP8.76□□□□□ -1.01
TROAP-208ENST00000548817 IQCHQ86VS3 1027 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 SMYD4Q8IYR2 804 aaPredicted RBP8.76□□□□□ -1.01
TROAP-208ENST00000548817 MFSD2AQ8NA29 543 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 KDM1BQ8NB78 822 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 OR2T34Q8NGX1 318 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 OR4C6Q8NH72 309 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 TTC17Q96AE7 1141 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 HSFY1Q96LI6 401 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 SERPINB11Q96P15 392 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 TRIM62Q9BVG3 475 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 SLC25A18Q9H1K4 315 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 RSPH9Q9H1X1 276 aaPredicted RBP8.76□□□□□ -1.01
TROAP-208ENST00000548817 ADNPQ9H2P0 1102 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 ST7Q9NRC1 585 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 GEMIN8Q9NWZ8 242 aaKnown RBP8.76□□□□□ -1.01
TROAP-208ENST00000548817 SLC12A6Q9UHW9 1150 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 COQ4Q9Y3A0 265 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 POLQO75417 2590 aa8.76□□□□□ -1.01
TROAP-208ENST00000548817 TBC1D3DA0A087WVF3 549 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 TBC1D3IA0A087WXS9 549 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 TBC1D3EA0A087X179 549 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 TBC1D3KA0A087X1G2 549 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 A0A1W2PP55 124 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 TBC1D3FA6NER0 549 aaPredicted RBP8.75□□□□□ -1.01
TROAP-208ENST00000548817 TBC1D3LB9A6J9 549 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 TRIM38O00635 465 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 SIN3BO75182 1162 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 MOCS2O96007 188 aaPredicted RBP8.75□□□□□ -1.01
TROAP-208ENST00000548817 ADH1BP00325 375 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 SRPRAP08240 638 aaKnown RBP8.75□□□□□ -1.01
TROAP-208ENST00000548817 FAM87AP0C7U9 286 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 TBC1D3HP0C7X1 549 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 SLC8A1P32418 973 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 NUDT1P36639 197 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 PRCPP42785 496 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms