RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 RNASEH2AO75792 299 aaKnown RBP11.7□□□□□ -0.54
BEST3-209ENST00000548658 ENDOD1O94919 500 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 FSBPO95073 299 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 IL1BP01584 269 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 GOT1P17174 413 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 SDC4P31431 198 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 FLT3P36888 993 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 GRIA4P48058 902 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 KLK7P49862 253 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 FMO1Q01740 532 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 CENPCQ03188 943 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 TYRO3Q06418 890 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 ZNF252P-AS1Q0IIN9 211 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 CCDC15Q0P6D6 951 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 GRIK2Q13002 908 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 OTUD1Q5VV17 481 aaPredicted RBP11.7□□□□□ -0.54
BEST3-209ENST00000548658 KIAA0895LQ68EN5 471 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 ZNF783Q6ZMS7 281 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 PIP4P1Q86T03 277 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 CIR1Q86X95 450 aaPredicted RBP11.7□□□□□ -0.54
BEST3-209ENST00000548658 DEFB124Q8NES8 71 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 OR2T34Q8NGX1 318 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 C1orf216Q8TAB5 229 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 OR8D1Q8WZ84 308 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 ALG14Q96F25 216 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 CCDC114Q96M63 670 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 FAM129BQ96TA1 746 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 BPIFA3Q9BQP9 254 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 KDM4CQ9H3R0 1056 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 MTG2Q9H4K7 406 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 FSCN3Q9NQT6 498 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 HS3ST2Q9Y278 367 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 PCDHB9Q9Y5E1 797 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 CACNA1EQ15878 2313 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 PCNX2A6NKB5 2137 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 IGLV3-10A0A075B6K4 115 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 A0A1W2PP55 124 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 ANKRD62A6NC57 917 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 FAM47DPA6NHR8 397 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 E9PAM4 449 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 GIPC1O14908 333 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 MCF2LO15068 1137 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 EPHB6O15197 1021 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 SLC7A4O43246 635 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 DFNA5O60443 496 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 GJB3O75712 270 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 TRIM16O95361 564 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 CALB1P05937 261 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 RHOCP08134 193 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 KRT3P12035 628 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 UNGP13051 313 aaPredicted RBP11.69□□□□□ -0.54
BEST3-209ENST00000548658 CHRNB2P17787 502 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 TFE3P19532 575 aaPredicted RBP11.69□□□□□ -0.54
BEST3-209ENST00000548658 OR1E1P30953 314 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 STK19P49842 368 aaPredicted RBP11.69□□□□□ -0.54
BEST3-209ENST00000548658 GALCP54803 685 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 RACK1P63244 317 aaKnown RBP11.69□□□□□ -0.54
BEST3-209ENST00000548658 SLC20A2Q08357 652 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 NCAPHQ15003 741 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 SUZ12Q15022 739 aaKnown RBP11.69□□□□□ -0.54
BEST3-209ENST00000548658 FILIP1LQ4L180 1135 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 C2CD6Q53TS8 623 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 PPP1R2P3Q6NXS1 205 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 STRADAQ7RTN6 431 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 BNIPLQ7Z465 357 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 C14orf80Q86SX3 495 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 PHF13Q86YI8 300 aaPredicted RBP11.69□□□□□ -0.54
BEST3-209ENST00000548658 STK40Q8N2I9 435 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 FRS2Q8WU20 508 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 SLC20A1Q8WUM9 679 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 CFAP57Q96MR6 1250 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 CNTNAP3BQ96NU0 1288 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 CNTNAP3Q9BZ76 1288 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 ZYG11BQ9C0D3 744 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 NEUROG2Q9H2A3 272 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 GAREM1Q9H706 876 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 ADAM22Q9P0K1 906 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 PPARGC1AQ9UBK2 798 aaKnown RBP11.69□□□□□ -0.54
BEST3-209ENST00000548658 MYO6Q9UM54 1294 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 OR51B4Q9Y5P0 310 aa11.69□□□□□ -0.54
BEST3-209ENST00000548658 PCDH15Q96QU1 1955 aa11.68□□□□□ -0.54
BEST3-209ENST00000548658 CXorf51AA0A1B0GTR3 108 aa11.68□□□□□ -0.54
BEST3-209ENST00000548658 A0A1W2PPC4 97 aa11.68□□□□□ -0.54
BEST3-209ENST00000548658 ILVBLA1L0T0 632 aa11.68□□□□□ -0.54
BEST3-209ENST00000548658 C1QTNF3-AMACRE9PGA6 284 aa11.68□□□□□ -0.54
BEST3-209ENST00000548658 SRGAP2O75044 1071 aa11.68□□□□□ -0.54
BEST3-209ENST00000548658 CNTN5O94779 1100 aa11.68□□□□□ -0.54
BEST3-209ENST00000548658 CD59P13987 128 aa11.68□□□□□ -0.54
BEST3-209ENST00000548658 FERP16591 822 aa11.68□□□□□ -0.54
BEST3-209ENST00000548658 DESP17661 470 aa11.68□□□□□ -0.54
BEST3-209ENST00000548658 ADRA1BP35368 520 aa11.68□□□□□ -0.54
BEST3-209ENST00000548658 NUDT1P36639 197 aa11.68□□□□□ -0.54
BEST3-209ENST00000548658 ETFBP38117 255 aa11.68□□□□□ -0.54
BEST3-209ENST00000548658 PTPN9P43378 593 aa11.68□□□□□ -0.54
BEST3-209ENST00000548658 PSMD8P48556 350 aa11.68□□□□□ -0.54
BEST3-209ENST00000548658 CSNK1EP49674 416 aaKnown RBP11.68□□□□□ -0.54
BEST3-209ENST00000548658 CCR5P51681 352 aa11.68□□□□□ -0.54
BEST3-209ENST00000548658 GSCP56915 257 aaPredicted RBP11.68□□□□□ -0.54
BEST3-209ENST00000548658 SIM1P81133 766 aaPredicted RBP11.68□□□□□ -0.54
BEST3-209ENST00000548658 ATP11AP98196 1134 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms