RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 SF3A3Q12874 501 aaKnown RBP eCLIP4.58□□□□□ -1.68
CCDC38-204ENST00000546816 TRAF1Q13077 416 aa4.58□□□□□ -1.68
CCDC38-204ENST00000546816 ARL13AQ5H913 290 aaPredicted RBP4.58□□□□□ -1.68
CCDC38-204ENST00000546816 ZNF569Q5MCW4 686 aa4.58□□□□□ -1.68
CCDC38-204ENST00000546816 TBC1D3GQ6DHY5 549 aa4.58□□□□□ -1.68
CCDC38-204ENST00000546816 TBC1D3CQ6IPX1 549 aa4.58□□□□□ -1.68
CCDC38-204ENST00000546816 SRLQ86TD4 932 aa4.58□□□□□ -1.68
CCDC38-204ENST00000546816 TBC1D3Q8IZP1 549 aaPredicted RBP4.58□□□□□ -1.68
CCDC38-204ENST00000546816 ENGASEQ8NFI3 743 aa4.58□□□□□ -1.68
CCDC38-204ENST00000546816 STYXQ8WUJ0 223 aa4.58□□□□□ -1.68
CCDC38-204ENST00000546816 WDR77Q9BQA1 342 aaPredicted RBP4.58□□□□□ -1.68
CCDC38-204ENST00000546816 SEZ6LQ9BYH1 1024 aa4.58□□□□□ -1.68
CCDC38-204ENST00000546816 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.58□□□□□ -1.68
CCDC38-204ENST00000546816 C6orf106Q9H6K1 298 aaPredicted RBP4.58□□□□□ -1.68
CCDC38-204ENST00000546816 ARNT2Q9HBZ2 717 aa4.58□□□□□ -1.68
CCDC38-204ENST00000546816 PNRC2Q9NPJ4 139 aaKnown RBP4.58□□□□□ -1.68
CCDC38-204ENST00000546816 ICAM5Q9UMF0 924 aa4.58□□□□□ -1.68
CCDC38-204ENST00000546816 CNTN6Q9UQ52 1028 aa4.58□□□□□ -1.68
CCDC38-204ENST00000546816 LZTS1Q9Y250 596 aa4.58□□□□□ -1.68
CCDC38-204ENST00000546816 TRBV5-7A0A0A0MS05 114 aa4.57□□□□□ -1.68
CCDC38-204ENST00000546816 LINC01565O15544 149 aa4.57□□□□□ -1.68
CCDC38-204ENST00000546816 LCATP04180 440 aa4.57□□□□□ -1.68
CCDC38-204ENST00000546816 SLC16A2P36021 539 aa4.57□□□□□ -1.68
CCDC38-204ENST00000546816 CRYZQ08257 329 aaKnown RBP4.57□□□□□ -1.68
CCDC38-204ENST00000546816 Q0VFX4 171 aa4.57□□□□□ -1.68
CCDC38-204ENST00000546816 BTBD16Q32M84 506 aa4.57□□□□□ -1.68
CCDC38-204ENST00000546816 CCDC181Q5TID7 509 aa4.57□□□□□ -1.68
CCDC38-204ENST00000546816 FBXL22Q6P050 247 aa4.57□□□□□ -1.68
CCDC38-204ENST00000546816 Q6ZTK2 550 aa4.57□□□□□ -1.68
CCDC38-204ENST00000546816 SLC25A41Q8N5S1 370 aa4.57□□□□□ -1.68
CCDC38-204ENST00000546816 FAM110DQ8TAY7 271 aaPredicted RBP4.57□□□□□ -1.68
CCDC38-204ENST00000546816 ZNF419Q96HQ0 510 aaPredicted RBP4.57□□□□□ -1.68
CCDC38-204ENST00000546816 NPAS1Q99742 590 aa4.57□□□□□ -1.68
CCDC38-204ENST00000546816 MAGED2Q9UNF1 606 aaPredicted RBP4.57□□□□□ -1.68
CCDC38-204ENST00000546816 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 RGS14O43566 566 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 TNFRSF6BO95407 300 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 LARGE1O95461 756 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 PKMP14618 531 aaKnown RBP4.56□□□□□ -1.68
CCDC38-204ENST00000546816 CPA1P15085 419 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 ARSBP15848 533 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 CHRNA5P30532 468 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 COMPP49747 757 aaPredicted RBP4.56□□□□□ -1.68
CCDC38-204ENST00000546816 HILS1P60008 231 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 PICALMQ13492 652 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 SHBQ15464 509 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 ALG10Q5BKT4 473 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 ALG10BQ5I7T1 473 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 AAGABQ6PD74 315 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 PRSS57Q6UWY2 283 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 KIAA1324Q6UXG2 1013 aaKnown RBP4.56□□□□□ -1.68
CCDC38-204ENST00000546816 TMEM200AQ86VY9 491 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 KLBQ86Z14 1044 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 TMEM217Q8N7C4 229 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 GABPB2Q8TAK5 448 aaPredicted RBP4.56□□□□□ -1.68
CCDC38-204ENST00000546816 RSC1A1Q92681 617 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 TMEM41AQ96HV5 264 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 TNIP3Q96KP6 325 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 TM6SF1Q9BZW5 370 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 DCLK3Q9C098 648 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 KRCC1Q9NPI7 259 aaPredicted RBP4.56□□□□□ -1.68
CCDC38-204ENST00000546816 RNF146Q9NTX7 359 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 CDC23Q9UJX2 597 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 PKP3Q9Y446 797 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 PCDHGB1Q9Y5G3 927 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 PTGDR2Q9Y5Y4 395 aa4.56□□□□□ -1.68
CCDC38-204ENST00000546816 A0A1B0GVT2 93 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 AGAP5A6NIR3 686 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 MBD3L5A6NJ08 208 aaPredicted RBP4.55□□□□□ -1.68
CCDC38-204ENST00000546816 I6L893 689 aaPredicted RBP4.55□□□□□ -1.68
CCDC38-204ENST00000546816 PPP1R3DO95685 299 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 KRT18P05783 430 aaKnown RBP4.55□□□□□ -1.68
CCDC38-204ENST00000546816 MYL1P05976 194 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 GYS1P13807 737 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 TNFSF8P32971 234 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 PPM1AP35813 382 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 STAT1P42224 750 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 ART1P52961 327 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 SELENOVP59797 346 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 ABATP80404 500 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 RNASELQ05823 741 aaKnown RBP4.55□□□□□ -1.68
CCDC38-204ENST00000546816 GPS2Q13227 327 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 PTK2BQ14289 1009 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 SPARCL1Q14515 664 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 KRTAP24-1Q3LI83 254 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 KRTAP5-4Q6L8H1 288 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 FAM83HQ6ZRV2 1179 aaPredicted RBP4.55□□□□□ -1.68
CCDC38-204ENST00000546816 GATAD2AQ86YP4 633 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 FAM217AQ8IXS0 508 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 FAM186BQ8IYM0 893 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 FAM71BQ8TC56 605 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 TMEM255BQ8WV15 326 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 HMGB4Q8WW32 186 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 TMEM120AQ9BXJ8 343 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 POLDIP3Q9BY77 421 aaKnown RBP4.55□□□□□ -1.68
CCDC38-204ENST00000546816 B3GNT4Q9C0J1 378 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 PCDHA10Q9Y5I2 948 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 CKAP5Q14008 2032 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 SCN5AQ14524 2016 aa4.55□□□□□ -1.68
CCDC38-204ENST00000546816 TCRBV7S3A2A0A539 114 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms