RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ZCCHC23Q6ZST2 131 aa12.23□□□□□ -0.45
CCDC38-202ENST00000546386 ANKRD33Q7Z3H0 272 aa12.23□□□□□ -0.45
CCDC38-202ENST00000546386 CMC1Q7Z7K0 106 aa12.23□□□□□ -0.45
CCDC38-202ENST00000546386 PTPRN2Q92932 1015 aa12.23□□□□□ -0.45
CCDC38-202ENST00000546386 ZNF669Q96BR6 464 aaPredicted RBP12.23□□□□□ -0.45
CCDC38-202ENST00000546386 RTP4Q96DX8 246 aa12.23□□□□□ -0.45
CCDC38-202ENST00000546386 STAMBPL1Q96FJ0 436 aa12.23□□□□□ -0.45
CCDC38-202ENST00000546386 SEC16BQ96JE7 1060 aa12.23□□□□□ -0.45
CCDC38-202ENST00000546386 ZNF333Q96JL9 665 aa12.23□□□□□ -0.45
CCDC38-202ENST00000546386 TTC25Q96NG3 672 aa12.23□□□□□ -0.45
CCDC38-202ENST00000546386 ZNF317Q96PQ6 595 aaPredicted RBP12.23□□□□□ -0.45
CCDC38-202ENST00000546386 CYTH2Q99418 400 aa12.23□□□□□ -0.45
CCDC38-202ENST00000546386 EBNA1BP2Q99848 306 aaKnown RBP12.23□□□□□ -0.45
CCDC38-202ENST00000546386 ZBED2Q9BTP6 218 aa12.23□□□□□ -0.45
CCDC38-202ENST00000546386 NKIRAS1Q9NYS0 192 aa12.23□□□□□ -0.45
CCDC38-202ENST00000546386 TBX21Q9UL17 535 aa12.23□□□□□ -0.45
CCDC38-202ENST00000546386 SCML2Q9UQR0 700 aa12.23□□□□□ -0.45
CCDC38-202ENST00000546386 HMX2A2RU54 273 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 MAFKO60675 156 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 STK10O94804 968 aaKnown RBP12.22□□□□□ -0.45
CCDC38-202ENST00000546386 MT-ND3P03897 115 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 KLKB1P03952 638 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 HLA-DQB2P05538 268 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 DRD4P21917 467 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 MLLT6P55198 1093 aaPredicted RBP12.22□□□□□ -0.45
CCDC38-202ENST00000546386 TWF1Q12792 350 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 SEPT6Q14141 434 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 SPDYCQ5MJ68 293 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 ARTNQ5T4W7 220 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 LDB1Q86U70 411 aaPredicted RBP12.22□□□□□ -0.45
CCDC38-202ENST00000546386 LGI2Q8N0V4 545 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 MYLIPQ8WY64 445 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 NTAN1Q96AB6 310 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 IPO11Q9UI26 975 aaKnown RBP12.22□□□□□ -0.45
CCDC38-202ENST00000546386 FAM169AQ9Y6X4 670 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 PTPRDP23468 1912 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 FAM47DPA6NHR8 397 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 COCHO43405 550 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 NMBRP28336 390 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 TMPRSS15P98073 1019 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 SCAPQ12770 1279 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 XRCC4Q13426 336 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 SEMA5AQ13591 1074 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 FAM133BQ5BKY9 247 aaKnown RBP12.22□□□□□ -0.45
CCDC38-202ENST00000546386 IL31Q6EBC2 164 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 ANKS3Q6ZW76 656 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 LRRC6Q86X45 466 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 OR7D4Q8NG98 312 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 TOP1MTQ969P6 601 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 PGAP3Q96FM1 320 aaPredicted RBP12.22□□□□□ -0.45
CCDC38-202ENST00000546386 CABS1Q96KC9 395 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 TMEM109Q9BVC6 243 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 FRMD8P1Q9BZ68 369 aaPredicted RBP12.22□□□□□ -0.45
CCDC38-202ENST00000546386 TLR9Q9NR96 1032 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 ARHGEF38Q9NXL2 777 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 DCTN4Q9UJW0 460 aa12.22□□□□□ -0.45
CCDC38-202ENST00000546386 MYOFQ9NZM1 2061 aa12.21□□□□□ -0.45
CCDC38-202ENST00000546386 FRYLO94915 3013 aa12.21□□□□□ -0.45
CCDC38-202ENST00000546386 CFAP69A5D8W1 941 aa12.21□□□□□ -0.45
CCDC38-202ENST00000546386 APOEP02649 317 aa12.21□□□□□ -0.45
CCDC38-202ENST00000546386 KITP10721 976 aa12.21□□□□□ -0.45
CCDC38-202ENST00000546386 ATP2A2P16615 1042 aaKnown RBP12.21□□□□□ -0.45
CCDC38-202ENST00000546386 AVPR1AP37288 418 aa12.21□□□□□ -0.45
CCDC38-202ENST00000546386 GLUD2P49448 558 aa12.21□□□□□ -0.45
CCDC38-202ENST00000546386 WDR5P61964 334 aaKnown RBP12.21□□□□□ -0.45
CCDC38-202ENST00000546386 CYP4F8P98187 520 aa12.21□□□□□ -0.45
CCDC38-202ENST00000546386 DSC2Q02487 901 aa12.21□□□□□ -0.45
CCDC38-202ENST00000546386 PPIDQ08752 370 aaKnown RBP12.21□□□□□ -0.45
CCDC38-202ENST00000546386 EIF4EBP2Q13542 120 aaPredicted RBP12.21□□□□□ -0.45
CCDC38-202ENST00000546386 SEPT7Q16181 437 aaKnown RBP12.21□□□□□ -0.45
CCDC38-202ENST00000546386 RELL1Q8IUW5 271 aa12.21□□□□□ -0.45
CCDC38-202ENST00000546386 IRGQQ8WZA9 623 aa12.21□□□□□ -0.45
CCDC38-202ENST00000546386 TBC1D31Q96DN5 1066 aa12.21□□□□□ -0.45
CCDC38-202ENST00000546386 SERPINB11Q96P15 392 aa12.21□□□□□ -0.45
CCDC38-202ENST00000546386 SLC9A7Q96T83 725 aa12.21□□□□□ -0.45
CCDC38-202ENST00000546386 FICDQ9BVA6 458 aa12.21□□□□□ -0.45
CCDC38-202ENST00000546386 FBXO44Q9H4M3 255 aa12.21□□□□□ -0.45
CCDC38-202ENST00000546386 TLR8Q9NR97 1041 aaKnown RBP12.21□□□□□ -0.45
CCDC38-202ENST00000546386 MTF2Q9Y483 593 aaPredicted RBP12.21□□□□□ -0.45
CCDC38-202ENST00000546386 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.21□□□□□ -0.46
CCDC38-202ENST00000546386 SDR42E2A6NKP2 422 aa12.21□□□□□ -0.46
CCDC38-202ENST00000546386 GRXCR1A8MXD5 290 aa12.21□□□□□ -0.46
CCDC38-202ENST00000546386 INPPL1O15357 1258 aa12.21□□□□□ -0.46
CCDC38-202ENST00000546386 C1QAP02745 245 aa12.21□□□□□ -0.46
CCDC38-202ENST00000546386 CTBP1Q13363 440 aa12.21□□□□□ -0.46
CCDC38-202ENST00000546386 ZNF460Q14592 562 aa12.21□□□□□ -0.46
CCDC38-202ENST00000546386 CRYMQ14894 314 aa12.21□□□□□ -0.46
CCDC38-202ENST00000546386 PARP6Q2NL67 630 aa12.21□□□□□ -0.46
CCDC38-202ENST00000546386 ARL14EPQ8N8R7 260 aaPredicted RBP12.21□□□□□ -0.46
CCDC38-202ENST00000546386 OR6K2Q8NGY2 324 aa12.21□□□□□ -0.46
CCDC38-202ENST00000546386 KCNV2Q8TDN2 545 aa12.21□□□□□ -0.46
CCDC38-202ENST00000546386 MARCOQ9UEW3 520 aaPredicted RBP12.21□□□□□ -0.46
CCDC38-202ENST00000546386 RRP15Q9Y3B9 282 aaKnown RBP12.21□□□□□ -0.46
CCDC38-202ENST00000546386 TMEM189-UBE2V1I3L0A0 370 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 TEX28O15482 410 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 BNIP3LO60238 219 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 LPXNO60711 386 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 OPHN1O60890 802 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 FAM163BP0C2L3 166 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 CD86P42081 329 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms