RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 SDR42E2A6NKP2 422 aa14.97□□□□□ -0.01
HOXC11-202ENST00000546378 SPATA31C2B4DYI2 1134 aa14.97□□□□□ -0.01
HOXC11-202ENST00000546378 HOXC6P09630 235 aa14.97□□□□□ -0.01
HOXC11-202ENST00000546378 CYP3A5P20815 502 aa14.97□□□□□ -0.01
HOXC11-202ENST00000546378 SULT1E1P49888 294 aa14.97□□□□□ -0.01
HOXC11-202ENST00000546378 SLC18A2Q05940 514 aa14.97□□□□□ -0.01
HOXC11-202ENST00000546378 PPIDQ08752 370 aaKnown RBP14.97□□□□□ -0.01
HOXC11-202ENST00000546378 PPP1R8Q12972 351 aaKnown RBP14.97□□□□□ -0.01
HOXC11-202ENST00000546378 MYLK3Q32MK0 819 aa14.97□□□□□ -0.01
HOXC11-202ENST00000546378 LRTOMTQ8WZ04 291 aa14.97□□□□□ -0.01
HOXC11-202ENST00000546378 OLFM3Q96PB7 478 aa14.97□□□□□ -0.01
HOXC11-202ENST00000546378 TLE6Q9H808 572 aa14.97□□□□□ -0.01
HOXC11-202ENST00000546378 RBMX2Q9Y388 322 aaKnown RBP14.97□□□□□ -0.01
HOXC11-202ENST00000546378 TTC24A2A3L6 582 aaPredicted RBP14.96□□□□□ -0.01
HOXC11-202ENST00000546378 MAGEC1O60732 1142 aa14.96□□□□□ -0.01
HOXC11-202ENST00000546378 PMPCBO75439 489 aa14.96□□□□□ -0.01
HOXC11-202ENST00000546378 CARTPTQ16568 116 aa14.96□□□□□ -0.01
HOXC11-202ENST00000546378 DBN1Q16643 649 aa14.96□□□□□ -0.01
HOXC11-202ENST00000546378 SCIMPQ6UWF3 145 aa14.96□□□□□ -0.01
HOXC11-202ENST00000546378 DSELQ8IZU8 1212 aa14.96□□□□□ -0.01
HOXC11-202ENST00000546378 IPMKQ8NFU5 416 aa14.96□□□□□ -0.01
HOXC11-202ENST00000546378 ARMC7Q9H6L4 198 aa14.96□□□□□ -0.01
HOXC11-202ENST00000546378 DFFAO00273 331 aa14.96□□□□□ -0.02
HOXC11-202ENST00000546378 NRP1O14786 923 aa14.96□□□□□ -0.02
HOXC11-202ENST00000546378 KLHL2O95198 593 aa14.96□□□□□ -0.02
HOXC11-202ENST00000546378 SERPINE1P05121 402 aa14.96□□□□□ -0.02
HOXC11-202ENST00000546378 LMO2P25791 158 aa14.96□□□□□ -0.02
HOXC11-202ENST00000546378 ZNF143P52747 638 aaPredicted RBP14.96□□□□□ -0.02
HOXC11-202ENST00000546378 NEDD8Q15843 81 aa14.96□□□□□ -0.02
HOXC11-202ENST00000546378 NOMO2Q5JPE7 1267 aa14.96□□□□□ -0.02
HOXC11-202ENST00000546378 CLVS1Q8IUQ0 354 aaPredicted RBP14.96□□□□□ -0.02
HOXC11-202ENST00000546378 SLC41A1Q8IVJ1 513 aa14.96□□□□□ -0.02
HOXC11-202ENST00000546378 PQLC1Q8N2U9 271 aa14.96□□□□□ -0.02
HOXC11-202ENST00000546378 HTR3CQ8WXA8 447 aa14.96□□□□□ -0.02
HOXC11-202ENST00000546378 SIGLEC10Q96LC7 697 aa14.96□□□□□ -0.02
HOXC11-202ENST00000546378 TBCBQ99426 244 aa14.96□□□□□ -0.02
HOXC11-202ENST00000546378 TRPC7Q9HCX4 862 aa14.96□□□□□ -0.02
HOXC11-202ENST00000546378 COPG2Q9UBF2 871 aa14.96□□□□□ -0.02
HOXC11-202ENST00000546378 ABT1Q9ULW3 272 aaKnown RBP14.96□□□□□ -0.02
HOXC11-202ENST00000546378 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.95□□□□□ -0.02
HOXC11-202ENST00000546378 MAN1A2O60476 641 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 SLC25A27O95847 323 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 PIK3R1P27986 724 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 GPD2P43304 727 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 ADARP55265 1226 aaKnown RBP14.95□□□□□ -0.02
HOXC11-202ENST00000546378 CDH13P55290 713 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 IL1RL1Q01638 556 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 TCEAL1Q15170 157 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 KIF19Q2TAC6 998 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 LSM12Q3MHD2 195 aaKnown RBP14.95□□□□□ -0.02
HOXC11-202ENST00000546378 ANKRD20A4Q4UJ75 823 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 ARL13AQ5H913 290 aaPredicted RBP14.95□□□□□ -0.02
HOXC11-202ENST00000546378 IL23RQ5VWK5 629 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 MBLAC2Q68D91 279 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 BNC2Q6ZN30 1099 aaPredicted RBP14.95□□□□□ -0.02
HOXC11-202ENST00000546378 ANKRD23Q86SG2 305 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 CHSY1Q86X52 802 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 DENND6AQ8IWF6 608 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 FBXW8Q8N3Y1 598 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 ZNF398Q8TD17 642 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 XYLT2Q9H1B5 865 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 ST6GALNAC4Q9H4F1 302 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 EPS8L2Q9H6S3 715 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 PLAC1Q9HBJ0 212 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 EMCNQ9ULC0 261 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 H0YCG3 227 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 M0QYT0 321 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 MAFGO15525 162 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 MSCO60682 206 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 JCHAINP01591 159 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 GRIA4P48058 902 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 PTK2BQ14289 1009 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 TMEM132DQ14C87 1099 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 PLCL1Q15111 1095 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 SOWAHAQ2M3V2 549 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 AGKQ53H12 422 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 TEX44Q53QW1 395 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 DNERQ8NFT8 737 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 GABPB2Q8TAK5 448 aaPredicted RBP14.95□□□□□ -0.02
HOXC11-202ENST00000546378 SLC7A14Q8TBB6 771 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 NT5C1AQ9BXI3 368 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 WDR41Q9HAD4 459 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 SNTG2Q9NY99 539 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 CNTN3Q9P232 1028 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 ATP8B3O60423 1300 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 FKBP6O75344 327 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 DHRS4L1P0CG22 281 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 TPP2P29144 1249 aaPredicted RBP14.95□□□□□ -0.02
HOXC11-202ENST00000546378 CPOXP36551 454 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 CCNA1P78396 465 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 CYLC2Q14093 348 aaPredicted RBP14.95□□□□□ -0.02
HOXC11-202ENST00000546378 ZIK1Q3SY52 487 aaPredicted RBP14.95□□□□□ -0.02
HOXC11-202ENST00000546378 XRRA1Q6P2D8 792 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 ACAD11Q709F0 780 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 RELL1Q8IUW5 271 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 METTL25Q8N6Q8 603 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 SPATA22Q8NHS9 363 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 P2RY11Q96G91 374 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 C7orf26Q96N11 449 aa14.95□□□□□ -0.02
HOXC11-202ENST00000546378 MPHOSPH6Q99547 160 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms