RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 C9orf64Q5T6V5 341 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 SARM1Q6SZW1 724 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 PRR23CQ6ZRP0 262 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 TMC6Q7Z403 805 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 SLFN11Q7Z7L1 901 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 VSTM4Q8IW00 320 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 DCAF4L2Q8NA75 395 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 CPLX3Q8WVH0 158 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 ERLEC1Q96DZ1 483 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 DNAJC7Q99615 494 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 C2orf49Q9BVC5 232 aaPredicted RBP12.19□□□□□ -0.46
YBX3-217ENST00000546164 CD93Q9NPY3 652 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 WSB2Q9NYS7 404 aaPredicted RBP12.19□□□□□ -0.46
YBX3-217ENST00000546164 CNOT8Q9UFF9 292 aaKnown RBP12.19□□□□□ -0.46
YBX3-217ENST00000546164 SLCO3A1Q9UIG8 710 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 VPS28Q9UK41 221 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 SCML1Q9UN30 329 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 NEU3Q9UQ49 428 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 HS3ST2Q9Y278 367 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 SCINQ9Y6U3 715 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 CACNA1AO00555 2505 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 CXorf51AA0A1B0GTR3 108 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 TTC34A8MYJ7 566 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 FAM72CH0Y354 149 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 SIN3BO75182 1162 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 LRIG2O94898 1065 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 ACADMP11310 421 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 RHOQP17081 205 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 OR1E1P30953 314 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 L1CAMP32004 1257 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 HOXD12P35452 270 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 PTGER3P43115 390 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 MAPKAPK2P49137 400 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 DHPSP49366 369 aaPredicted RBP12.18□□□□□ -0.46
YBX3-217ENST00000546164 STK19P49842 368 aaPredicted RBP12.18□□□□□ -0.46
YBX3-217ENST00000546164 RPL6Q02878 288 aaKnown RBP12.18□□□□□ -0.46
YBX3-217ENST00000546164 CREB5Q02930 508 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 ZNF252P-AS1Q0IIN9 211 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 EFHC2Q5JST6 749 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 FAM72AQ5TYM5 149 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 PEAR1Q5VY43 1037 aaPredicted RBP12.18□□□□□ -0.46
YBX3-217ENST00000546164 LYSMD4Q5XG99 296 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 ZNF776Q68DI1 518 aaPredicted RBP12.18□□□□□ -0.46
YBX3-217ENST00000546164 FAM72DQ6L9T8 149 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 CYP2U1Q7Z449 544 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 TFAP2DQ7Z6R9 452 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 NLRP14Q86W24 1093 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 FAM72BQ86X60 149 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 TMEFF1Q8IYR6 380 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 CADM4Q8NFZ8 388 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 FRS2Q8WU20 508 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 PTPRN2Q92932 1015 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 ZNF653Q96CK0 615 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 TOE1Q96GM8 510 aaKnown RBP12.18□□□□□ -0.46
YBX3-217ENST00000546164 ZNF419Q96HQ0 510 aaPredicted RBP12.18□□□□□ -0.46
YBX3-217ENST00000546164 RPL10LQ96L21 214 aaKnown RBP12.18□□□□□ -0.46
YBX3-217ENST00000546164 PSMB7Q99436 277 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 MUC3BQ9H195 1237 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 PCED1AQ9H1Q7 454 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 MTG2Q9H4K7 406 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 MRPL47Q9HD33 250 aaKnown RBP12.18□□□□□ -0.46
YBX3-217ENST00000546164 TMEM248Q9NWD8 314 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 ARHGAP20Q9P2F6 1191 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 SLC25A13Q9UJS0 675 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 NENFQ9UMX5 172 aa12.18□□□□□ -0.46
YBX3-217ENST00000546164 DNAH14Q0VDD8 3507 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 A0A087X0T9 212 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 A0A0D9SEW6 157 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 EIF3CLB5ME19 914 aaKnown RBP12.17□□□□□ -0.46
YBX3-217ENST00000546164 RNASEH1O60930 286 aaKnown RBP12.17□□□□□ -0.46
YBX3-217ENST00000546164 DNTTP04053 509 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 FAM228BP0C875 321 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 PSMA2P25787 234 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 HTR7P34969 479 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 ETFBP38117 255 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 KRT83P78385 493 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 ZNF33AQ06730 810 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 SEMA3BQ13214 749 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 ELAVL3Q14576 367 aaKnown RBP12.17□□□□□ -0.46
YBX3-217ENST00000546164 TTC31Q49AM3 519 aaPredicted RBP12.17□□□□□ -0.46
YBX3-217ENST00000546164 SCYL2Q6P3W7 929 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 ALKBH5Q6P6C2 394 aaKnown RBP12.17□□□□□ -0.46
YBX3-217ENST00000546164 USP30Q70CQ3 517 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 DNAAF5Q86Y56 855 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 SYT12Q8IV01 421 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 SLC41A1Q8IVJ1 513 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 SH2D3CQ8N5H7 860 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 ARFGAP1Q8N6T3 406 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 OR8K1Q8NGG5 319 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 FOXJ1Q92949 421 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 TBC1D31Q96DN5 1066 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 EIF3CQ99613 913 aaKnown RBP12.17□□□□□ -0.46
YBX3-217ENST00000546164 NCAPGQ9BPX3 1015 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.17□□□□□ -0.46
YBX3-217ENST00000546164 DLL3Q9NYJ7 618 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 EVLQ9UI08 416 aaPredicted RBP12.17□□□□□ -0.46
YBX3-217ENST00000546164 VPS51Q9UID3 782 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 PILRBQ9UKJ0 227 aa12.17□□□□□ -0.46
YBX3-217ENST00000546164 FZD10Q9ULW2 581 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms