RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 STK39Q9UEW8 545 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 PCSK1NQ9UHG2 260 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 PSMD13Q9UNM6 376 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 ANKRD6Q9Y2G4 727 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 PCDHB12Q9Y5F1 795 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 SCN4AP35499 1836 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 A0A1W2PNR3 127 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 ARHGAP10A1A4S6 786 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 PRR5-ARHGAP8B1AHC4 643 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 TIMM44O43615 452 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 SIN3BO75182 1162 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 XYLBO75191 536 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 DGKIO75912 1065 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 RAD17O75943 681 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 TNFAIP8O95379 198 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 SLC25A27O95847 323 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 PROCP04070 461 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 CAPNS1P04632 268 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 POLBP06746 335 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 FGF3P11487 239 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-225ENST00000545920 COL6A2P12110 1019 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 VCLP18206 1134 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 AMPD1P23109 780 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 IL4RP24394 825 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 CYP2F1P24903 491 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 RBL1P28749 1068 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 GSTT1P30711 240 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 ARL4AP40617 200 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 RPL5P46777 297 aaKnown RBP6.62□□□□□ -1.35
SNHG1-225ENST00000545920 SERPINB8P50452 374 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 CHN2P52757 468 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 MTTPP55157 894 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 ABCE1P61221 599 aaKnown RBP6.62□□□□□ -1.35
SNHG1-225ENST00000545920 ARHGAP8P85298 464 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 PTSQ03393 145 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 GAD2Q05329 585 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 KDSRQ06136 332 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 ZNF33AQ06730 810 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 LSAMPQ13449 338 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 TUBB3Q13509 450 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 TMEM132DQ14C87 1099 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 TMEM132BQ14DG7 1078 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 PDK1Q15118 436 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 USP41Q3LFD5 358 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 HSF5Q4G112 596 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-225ENST00000545920 TBC1D10BQ4KMP7 808 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-225ENST00000545920 KCNT1Q5JUK3 1230 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 RARS2Q5T160 578 aaKnown RBP6.62□□□□□ -1.35
SNHG1-225ENST00000545920 OGFRL1Q5TC84 451 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-225ENST00000545920 HEATR6Q6AI08 1181 aaKnown RBP6.62□□□□□ -1.35
SNHG1-225ENST00000545920 OR6B2Q6IFH4 312 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 OLFML1Q6UWY5 402 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 PACS1Q6VY07 963 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 CDHR3Q6ZTQ4 885 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 TTC7BQ86TV6 843 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 KBTBD6Q86V97 674 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 AHI1Q8N157 1196 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 FBXW8Q8N3Y1 598 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 CPSF7Q8N684 471 aaKnown RBP6.62□□□□□ -1.35
SNHG1-225ENST00000545920 PQLC3Q8N755 202 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 C1orf127Q8N9H9 656 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 DRAXINQ8NBI3 349 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-225ENST00000545920 RNF149Q8NC42 400 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 RP9Q8TA86 221 aaKnown RBP6.62□□□□□ -1.35
SNHG1-225ENST00000545920 PCDH19Q8TAB3 1148 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 SLC7A14Q8TBB6 771 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 DTX3LQ8TDB6 740 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 PDCD6IPQ8WUM4 868 aaKnown RBP6.62□□□□□ -1.35
SNHG1-225ENST00000545920 UCMAQ8WVF2 138 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 TFB1MQ8WVM0 346 aaKnown RBP6.62□□□□□ -1.35
SNHG1-225ENST00000545920 JDP2Q8WYK2 163 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 OPTNQ96CV9 577 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 ZBTB10Q96DT7 871 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 HPDLQ96IR7 371 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 HSFY1Q96LI6 401 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 HEXIM2Q96MH2 286 aaKnown RBP6.62□□□□□ -1.35
SNHG1-225ENST00000545920 FAM210AQ96ND0 272 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 PCYT2Q99447 389 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 VAT1Q99536 393 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 KLF6Q99612 283 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-225ENST00000545920 MRPS26Q9BYN8 205 aaKnown RBP6.62□□□□□ -1.35
SNHG1-225ENST00000545920 ELOVL4Q9GZR5 314 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 CDT1Q9H211 546 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 ZNF696Q9H7X3 374 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 LRRC40Q9H9A6 602 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 NEUROD4Q9HD90 331 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 TIMMDC1Q9NPL8 285 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 C8orf4Q9NR00 106 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 PCMTD2Q9NV79 361 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 STK32BQ9NY57 414 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 IGSF9Q9P2J2 1179 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 ATXN10Q9UBB4 475 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 SAE1Q9UBE0 346 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-225ENST00000545920 COPG2Q9UBF2 871 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 CYTH4Q9UIA0 394 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 SIX4Q9UIU6 781 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 CDH22Q9UJ99 828 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 DNAJC16Q9Y2G8 782 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 RIPK3Q9Y572 518 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 GMEB1Q9Y692 573 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms