RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 PRPSAP2O60256 369 aa13.09□□□□□ -0.31
PDZD4-209ENST00000544474 VDRP11473 427 aa13.09□□□□□ -0.31
PDZD4-209ENST00000544474 PDGFRAP16234 1089 aa13.09□□□□□ -0.31
PDZD4-209ENST00000544474 POLR2EP19388 210 aaKnown RBP13.09□□□□□ -0.31
PDZD4-209ENST00000544474 TBXAS1P24557 533 aaPredicted RBP13.09□□□□□ -0.31
PDZD4-209ENST00000544474 MPSTP25325 297 aa13.09□□□□□ -0.31
PDZD4-209ENST00000544474 MAP4P27816 1152 aaKnown RBP13.09□□□□□ -0.31
PDZD4-209ENST00000544474 NKX2-5P52952 324 aaPredicted RBP13.09□□□□□ -0.31
PDZD4-209ENST00000544474 KRT76Q01546 638 aa13.09□□□□□ -0.31
PDZD4-209ENST00000544474 WASHC5Q12768 1159 aa13.09□□□□□ -0.31
PDZD4-209ENST00000544474 DENND1BQ6P3S1 775 aa13.09□□□□□ -0.31
PDZD4-209ENST00000544474 SLC39A4Q6P5W5 647 aa13.09□□□□□ -0.31
PDZD4-209ENST00000544474 DRICH1Q6PGQ1 229 aaPredicted RBP13.09□□□□□ -0.31
PDZD4-209ENST00000544474 FBXW8Q8N3Y1 598 aa13.09□□□□□ -0.31
PDZD4-209ENST00000544474 TTC39CQ8N584 583 aa13.09□□□□□ -0.31
PDZD4-209ENST00000544474 SLC4A11Q8NBS3 891 aa13.09□□□□□ -0.31
PDZD4-209ENST00000544474 EMID1Q96A84 441 aaPredicted RBP13.09□□□□□ -0.31
PDZD4-209ENST00000544474 TAAR1Q96RJ0 339 aa13.09□□□□□ -0.31
PDZD4-209ENST00000544474 RMDN3Q96TC7 470 aa13.09□□□□□ -0.31
PDZD4-209ENST00000544474 APBA2Q99767 749 aa13.09□□□□□ -0.31
PDZD4-209ENST00000544474 KLC2Q9H0B6 622 aa13.09□□□□□ -0.31
PDZD4-209ENST00000544474 POLR3FQ9H1D9 316 aaPredicted RBP13.09□□□□□ -0.31
PDZD4-209ENST00000544474 THAP1Q9NVV9 213 aa13.09□□□□□ -0.31
PDZD4-209ENST00000544474 FEM1BQ9UK73 627 aa13.09□□□□□ -0.31
PDZD4-209ENST00000544474 SATB2Q9UPW6 733 aa13.09□□□□□ -0.31
PDZD4-209ENST00000544474 SBF2Q86WG5 1849 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 TMEM191CA6NGB0 347 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 PHGDHO43175 533 aaKnown RBP13.08□□□□□ -0.32
PDZD4-209ENST00000544474 AQP9O43315 295 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 ENTPD3O75355 529 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 KLHL2O95198 593 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 BPGMP07738 259 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 TMEM191BP0C7N4 346 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 MS4A2Q01362 244 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 SLC12A1Q13621 1099 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 APOFQ13790 326 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 SF3B4Q15427 424 aaKnown RBP eCLIP13.08□□□□□ -0.32
PDZD4-209ENST00000544474 OTUD3Q5T2D3 398 aaPredicted RBP13.08□□□□□ -0.32
PDZD4-209ENST00000544474 CALML6Q8TD86 181 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 NKD2Q969F2 451 aaPredicted RBP13.08□□□□□ -0.32
PDZD4-209ENST00000544474 MTG1Q9BT17 334 aaPredicted RBP13.08□□□□□ -0.32
PDZD4-209ENST00000544474 ADNPQ9H2P0 1102 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 SNCAIPQ9Y6H5 919 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 TMEM233B4DJY2 109 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 M0QYV0 167 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 NRP1O14786 923 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 ENO2P09104 434 aaPredicted RBP13.08□□□□□ -0.32
PDZD4-209ENST00000544474 NAT2P11245 290 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 IDH3AP50213 366 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 CYP2A13Q16696 494 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 IL23RQ5VWK5 629 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 RNF19BQ6ZMZ0 732 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 BNC2Q6ZN30 1099 aaPredicted RBP13.08□□□□□ -0.32
PDZD4-209ENST00000544474 UNC5AQ6ZN44 842 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 ZBTB49Q6ZSB9 765 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 GPR141Q7Z602 305 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 ZNF276Q8N554 614 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 CHPT1Q8WUD6 406 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 CCDC106Q9BWC9 280 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 SIAEQ9HAT2 523 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 SNX9Q9Y5X1 595 aa13.08□□□□□ -0.32
PDZD4-209ENST00000544474 TGDSO95455 350 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 CCDC130P13994 396 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 ALDH4A1P30038 563 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 SFNP31947 248 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 ETV4P43268 484 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 HSD17B4P51659 736 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 ATXN1P54253 815 aaKnown RBP13.07□□□□□ -0.32
PDZD4-209ENST00000544474 WDR45BQ5MNZ6 344 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 NANOGP8Q6NSW7 305 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 NAT8LQ8N9F0 302 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 MCPH1Q8NEM0 835 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 TFAP2BQ92481 460 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 FBXL18Q96ME1 805 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 NAA50Q9GZZ1 169 aaKnown RBP13.07□□□□□ -0.32
PDZD4-209ENST00000544474 PCDHA10Q9Y5I2 948 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 PLOD2O00469 737 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 LRCH4O75427 683 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 FBXO21O94952 628 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 LYPLA2O95372 231 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 ZNF23P17027 643 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 KDELR1P24390 212 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 NAGLUP54802 743 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 ZNF252P-AS1Q0IIN9 211 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 AMHR2Q16671 573 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 RTKN2Q8IZC4 609 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 RYBPQ8N488 228 aaPredicted RBP13.07□□□□□ -0.32
PDZD4-209ENST00000544474 CLK4Q9HAZ1 481 aaKnown RBP13.07□□□□□ -0.32
PDZD4-209ENST00000544474 TCF7L2Q9NQB0 619 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 GPRC5DQ9NZD1 345 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 SLC39A10Q9ULF5 831 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 ST14Q9Y5Y6 855 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 PSMD12O00232 456 aaPredicted RBP13.07□□□□□ -0.32
PDZD4-209ENST00000544474 GPC4O75487 556 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 KRT7P08729 469 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 UGT1A1P22309 533 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 UGT1A4P22310 534 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 MMP8P22894 467 aa13.07□□□□□ -0.32
PDZD4-209ENST00000544474 EEF1DP29692 281 aaKnown RBP13.07□□□□□ -0.32
PDZD4-209ENST00000544474 UGT1A3P35503 534 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms