RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ZNF513Q8N8E2 541 aaPredicted RBP14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 OR7D4Q8NG98 312 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 CYB5D2Q8WUJ1 264 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 UBE2Q2Q8WVN8 375 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 SORCS1Q8WY21 1168 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 ALG3Q92685 438 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 ARHGEF2Q92974 986 aaKnown RBP14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 FAF2Q96CS3 445 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 CELF6Q96J87 481 aaKnown RBP14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 RNF157Q96PX1 679 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 MAGEH1Q9H213 219 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 ATP13A1Q9HD20 1204 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 PLA2G4CQ9UP65 541 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 MFHAS1Q9Y4C4 1052 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 NUP205Q92621 2012 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 FAM86C2PA6NEL3 165 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ZNF487B1APH4 448 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 CBX4O00257 560 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 DFFAO00273 331 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 APOL1O14791 398 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 DDX3YO15523 660 aaKnown RBP14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ASLP04424 464 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ACVRL1P37023 503 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 YBEYP58557 167 aaPredicted RBP14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 SULT2A1Q06520 285 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 E2F5Q15329 346 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 PARP15Q460N3 678 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 HS1BP3Q53T59 392 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ZNF687Q8N1G0 1237 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 SYNPOQ8N3V7 929 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 LZTR1Q8N653 840 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 NPWQ8N729 165 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 RPLP0P6Q8NHW5 317 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 C2orf49Q9BVC5 232 aaPredicted RBP14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ZDHHC4Q9NPG8 344 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ETNK2Q9NVF9 386 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 SLC25A13Q9UJS0 675 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 HPCAL4Q9UM19 191 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 STARD13Q9Y3M8 1113 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 CHD5Q8TDI0 1954 aa14.83□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ANTXRLA6NF34 631 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ARHGAP42A6NI28 874 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 RASA4BC9J798 803 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 RASA4O43374 803 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 KRT10P13645 584 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 AOC1P19801 751 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 CDKN2BP42772 138 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 KIR2DL1P43626 348 aaPredicted RBP14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 CLCN5P51795 746 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 COPS2P61201 443 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 DYNLT1P63172 113 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 MRPS21P82921 87 aaKnown RBP14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ECT2LQ008S8 904 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 FZD5Q13467 585 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 EGFLAMQ63HQ2 1017 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 NCBP2-AS2Q69YL0 99 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 Q6ZS52 159 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 CHPFQ8IZ52 775 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 SLC35F6Q8N357 371 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 C17orf53Q8N3J3 647 aaPredicted RBP14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 PQLC3Q8N755 202 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 DCAF4L2Q8NA75 395 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 NETO2Q8NC67 525 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 KCNV2Q8TDN2 545 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 TTC17Q96AE7 1141 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ALG14Q96F25 216 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 HMCESQ96FZ2 354 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 PSMB7Q99436 277 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 SLC39A8Q9C0K1 460 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 NOL6Q9H6R4 1146 aaKnown RBP14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 OR51B4Q9Y5P0 310 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 A0A0C4DFX4 3053 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 MYO18AQ92614 2054 aaKnown RBP14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 hCG_1818297A0A087WSY0 165 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 PI15O43692 258 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 SNAP91O60641 907 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 DLDP09622 509 aaKnown RBP14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 PYGMP11217 842 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ZFXP17010 805 aaPredicted RBP14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 GLDCP23378 1020 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 DEKP35659 375 aaKnown RBP14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 NNMTP40261 264 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 CTSOP43234 321 aaPredicted RBP14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 PAPOLAP51003 745 aaKnown RBP14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ST8SIA6P61647 398 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 GNG11P61952 73 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ZNF211Q13398 564 aaPredicted RBP14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 TFDP2Q14188 446 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 PPP2R5EQ16537 467 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 FNDC3BQ53EP0 1204 aaKnown RBP14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 SDE2Q6IQ49 451 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 TRMT11Q7Z4G4 463 aaKnown RBP14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 CCDC33Q8N5R6 958 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ALLCQ8N6M5 410 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 USP33Q8TEY7 942 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ACDQ96AP0 544 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 CLDN23Q96B33 292 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 RPL10LQ96L21 214 aaKnown RBP14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 KLC2Q9H0B6 622 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 LRRC19Q9H756 370 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms