RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 NDFIP2Q9NV92 336 aa9.55□□□□□ -0.88
GNE-206ENST00000543356 LGALS13Q9UHV8 139 aa9.55□□□□□ -0.88
GNE-206ENST00000543356 LINC01553A4QN01 128 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 ERI2A8K979 691 aaKnown RBP9.54□□□□□ -0.88
GNE-206ENST00000543356 F5H5T6 163 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 MATN3O15232 486 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 CACNG3O60359 315 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 SUN1O94901 812 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 LATS1O95835 1130 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 OLFM2O95897 454 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 LRG1P02750 347 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 NR1D1P20393 614 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 ELK3P41970 407 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 IRAK1P51617 712 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 SKOR1P84550 965 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 LONRF1Q17RB8 773 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 ALFQ53S48 1182 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 FAM133BQ5BKY9 247 aaKnown RBP9.54□□□□□ -0.88
GNE-206ENST00000543356 RTL10Q7L3V2 364 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 PID1Q7Z2X4 250 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 TDRPQ86YL5 185 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 MIEF2Q96C03 454 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 IL12RB2Q99665 862 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 GORASP1Q9BQQ3 440 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 VPS37BQ9H9H4 285 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 PSD3Q9NYI0 1048 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 C2orf78A6NCI8 922 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 C2orf71A6NGG8 1288 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 ZBTB24O43167 697 aaPredicted RBP9.54□□□□□ -0.88
GNE-206ENST00000543356 STC2O76061 302 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 CNTN5O94779 1100 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 GLUD1P00367 558 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 C8AP07357 584 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 GSTA2P09210 222 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 PAX7P23759 505 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 ATP5DP30049 168 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 CD68P34810 354 aaPredicted RBP9.54□□□□□ -0.88
GNE-206ENST00000543356 PAPOLAP51003 745 aaKnown RBP9.54□□□□□ -0.88
GNE-206ENST00000543356 ERVFC1P60507 584 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 RASA2Q15283 850 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 HP1BP3Q5SSJ5 553 aaPredicted RBP9.54□□□□□ -0.88
GNE-206ENST00000543356 FAM182AQ5T1J6 154 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 SYCP2LQ5T4T6 812 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 LRRC8BQ6P9F7 803 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 ARHGAP36Q6ZRI8 547 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 TMC8Q8IU68 726 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 AGGF1Q8N302 714 aaeCLIP9.54□□□□□ -0.88
GNE-206ENST00000543356 ARFGAP2Q8N6H7 521 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 MRPL43Q8N983 215 aaKnown RBP9.54□□□□□ -0.88
GNE-206ENST00000543356 KREMEN2Q8NCW0 462 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 SPPL3Q8TCT6 385 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 MAML1Q92585 1016 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 RPRD1AQ96P16 312 aaPredicted RBP9.54□□□□□ -0.88
GNE-206ENST00000543356 PPP1R2P1Q96PQ5 205 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 LRRC3Q9BY71 257 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 TLR9Q9NR96 1032 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 EURLQ9NYK6 297 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 NOVA2Q9UNW9 492 aaKnown RBP9.54□□□□□ -0.88
GNE-206ENST00000543356 CHMP2BQ9UQN3 213 aa9.54□□□□□ -0.88
GNE-206ENST00000543356 DENND4CQ5VZ89 1909 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 EXOC1LA0A1B0GW35 172 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 TLDC2A0PJX2 215 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 ARHGAP42A6NI28 874 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 CDH16O75309 829 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 AP2A1O95782 977 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 RB1P06400 928 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 SPATA31D3P0C874 917 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 CCNB1P14635 433 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 SLC6A4P31645 630 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 MMP13P45452 471 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 IFNAR2P48551 515 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 KLHL38Q2WGJ6 581 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 ANO4Q32M45 955 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 PARP15Q460N3 678 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 RABGAP1LQ5R372 815 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 SPATA31D4Q6ZUB0 917 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 TFAP2DQ7Z6R9 452 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 IGDCC3Q8IVU1 814 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 PALM2Q8IXS6 379 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 PDCD7Q8N8D1 485 aaKnown RBP9.53□□□□□ -0.88
GNE-206ENST00000543356 POF1BQ8WVV4 589 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 ZFRQ96KR1 1074 aaKnown RBP9.53□□□□□ -0.88
GNE-206ENST00000543356 RNF38Q9H0F5 515 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 ACSS3Q9H6R3 686 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 ALG13Q9NP73 1137 aaKnown RBP9.53□□□□□ -0.88
GNE-206ENST00000543356 SLC24A2Q9UI40 661 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 STOML2Q9UJZ1 356 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 SHROOM3Q8TF72 1996 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 GOLGA6L7A0A1B0GV03 622 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 SMIM23A6NLE4 172 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 RASA4BC9J798 803 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 PSMD3O43242 534 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 RASA4O43374 803 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 AVILO75366 819 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 JCHAINP01591 159 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 PFKLP17858 780 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 NFKB1P19838 968 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 DNAJB1P25685 340 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 CORO1AP31146 461 aaKnown RBP9.53□□□□□ -0.88
GNE-206ENST00000543356 SLCO1A2P46721 670 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms