RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 VPS45Q9NRW7 570 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 ARHGAP20Q9P2F6 1191 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 SLCO3A1Q9UIG8 710 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 SCML1Q9UN30 329 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 DOCK4Q8N1I0 1966 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 A0A087X0T9 212 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 TTC34A8MYJ7 566 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 FAM72CH0Y354 149 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 RNASEH1O60930 286 aaKnown RBP16.68■□□□□ 0.26
CIT-212ENST00000543239 SIN3BO75182 1162 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 NDUFS2O75306 463 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 LRIG2O94898 1065 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 FAM228BP0C875 321 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 RHOQP17081 205 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 PSMA2P25787 234 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 L1CAMP32004 1257 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 MAPKAPK2P49137 400 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 STK19P49842 368 aaPredicted RBP16.68■□□□□ 0.26
CIT-212ENST00000543239 C9orf64Q5T6V5 341 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 FAM72AQ5TYM5 149 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 FAM72DQ6L9T8 149 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 SCYL2Q6P3W7 929 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 PRR23CQ6ZRP0 262 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 FAM72BQ86X60 149 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 OR8K1Q8NGG5 319 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 TBC1D31Q96DN5 1066 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 PSMB7Q99436 277 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 MTG2Q9H4K7 406 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 CD93Q9NPY3 652 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 TMEM248Q9NWD8 314 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 WSB2Q9NYS7 404 aaPredicted RBP16.68■□□□□ 0.26
CIT-212ENST00000543239 FZD10Q9ULW2 581 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 NEU3Q9UQ49 428 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 HS3ST2Q9Y278 367 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 THADAQ6YHU6 1953 aa16.68■□□□□ 0.26
CIT-212ENST00000543239 CXorf51AA0A1B0GTR3 108 aa16.67■□□□□ 0.26
CIT-212ENST00000543239 PRR5-ARHGAP8B1AHC4 643 aa16.67■□□□□ 0.26
CIT-212ENST00000543239 EIF3CLB5ME19 914 aaKnown RBP16.67■□□□□ 0.26
CIT-212ENST00000543239 ATP9BO43861 1147 aa16.67■□□□□ 0.26
CIT-212ENST00000543239 RNF8O76064 485 aa16.67■□□□□ 0.26
CIT-212ENST00000543239 DNTTP04053 509 aa16.67■□□□□ 0.26
CIT-212ENST00000543239 ETFBP38117 255 aa16.67■□□□□ 0.26
CIT-212ENST00000543239 PTGER3P43115 390 aa16.67■□□□□ 0.26
CIT-212ENST00000543239 RPS14P62263 151 aaKnown RBP16.67■□□□□ 0.26
CIT-212ENST00000543239 ARHGAP8P85298 464 aa16.67■□□□□ 0.26
CIT-212ENST00000543239 ZNF252P-AS1Q0IIN9 211 aa16.67■□□□□ 0.26
CIT-212ENST00000543239 TTC31Q49AM3 519 aaPredicted RBP16.67■□□□□ 0.26
CIT-212ENST00000543239 LYSMD4Q5XG99 296 aa16.67■□□□□ 0.26
CIT-212ENST00000543239 RWDD4Q6NW29 188 aaKnown RBP16.67■□□□□ 0.26
CIT-212ENST00000543239 ALKBH5Q6P6C2 394 aaKnown RBP16.67■□□□□ 0.26
CIT-212ENST00000543239 NLRP14Q86W24 1093 aa16.67■□□□□ 0.26
CIT-212ENST00000543239 CACUL1Q86Y37 369 aa16.67■□□□□ 0.26
CIT-212ENST00000543239 PTPRN2Q92932 1015 aa16.67■□□□□ 0.26
CIT-212ENST00000543239 TOE1Q96GM8 510 aaKnown RBP16.67■□□□□ 0.26
CIT-212ENST00000543239 EIF3CQ99613 913 aaKnown RBP16.67■□□□□ 0.26
CIT-212ENST00000543239 NCAPGQ9BPX3 1015 aa16.67■□□□□ 0.26
CIT-212ENST00000543239 ZNHIT6Q9NWK9 470 aaKnown RBP16.67■□□□□ 0.26
CIT-212ENST00000543239 MYO1AQ9UBC5 1043 aa16.67■□□□□ 0.26
CIT-212ENST00000543239 VPS51Q9UID3 782 aa16.67■□□□□ 0.26
CIT-212ENST00000543239 ABCA7Q8IZY2 2146 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 A0A0D9SEW6 157 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 SSU72P8A0A1W2PR75 194 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 MFAP3LO75121 409 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 HTR7P34969 479 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 HOXD12P35452 270 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 NUMBP49757 651 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 GNA12Q03113 381 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 ZNF33AQ06730 810 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 SFSWAPQ12872 951 aaKnown RBP16.66■□□□□ 0.26
CIT-212ENST00000543239 SEMA3BQ13214 749 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 ELAVL3Q14576 367 aaKnown RBP16.66■□□□□ 0.26
CIT-212ENST00000543239 ACAP1Q15027 740 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 TSR1Q2NL82 804 aaKnown RBP16.66■□□□□ 0.26
CIT-212ENST00000543239 PEAR1Q5VY43 1037 aaPredicted RBP16.66■□□□□ 0.26
CIT-212ENST00000543239 USP30Q70CQ3 517 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 SYT12Q8IV01 421 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 SH2D3CQ8N5H7 860 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 C12orf50Q8NA57 414 aaPredicted RBP16.66■□□□□ 0.26
CIT-212ENST00000543239 CADM4Q8NFZ8 388 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 FRS2Q8WU20 508 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 FOXJ1Q92949 421 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 ZNF419Q96HQ0 510 aaPredicted RBP16.66■□□□□ 0.26
CIT-212ENST00000543239 EPAS1Q99814 870 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 MAGEB5Q9BZ81 275 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 PCED1AQ9H1Q7 454 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 NENFQ9UMX5 172 aa16.66■□□□□ 0.26
CIT-212ENST00000543239 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.66■□□□□ 0.26
CIT-212ENST00000543239 TNRC6BQ9UPQ9 1833 aaKnown RBP16.66■□□□□ 0.26
CIT-212ENST00000543239 SRCP12931 536 aa16.65■□□□□ 0.26
CIT-212ENST00000543239 EIF4A3P38919 411 aaKnown RBP16.65■□□□□ 0.26
CIT-212ENST00000543239 CLCN6P51797 869 aa16.65■□□□□ 0.26
CIT-212ENST00000543239 MAPK8IP2Q13387 824 aaPredicted RBP16.65■□□□□ 0.26
CIT-212ENST00000543239 CCDC6Q16204 474 aa16.65■□□□□ 0.26
CIT-212ENST00000543239 CCDC122Q5T0U0 273 aa16.65■□□□□ 0.26
CIT-212ENST00000543239 RETSATQ6NUM9 610 aa16.65■□□□□ 0.26
CIT-212ENST00000543239 ARMCX6Q7L4S7 300 aa16.65■□□□□ 0.26
CIT-212ENST00000543239 DSG4Q86SJ6 1040 aa16.65■□□□□ 0.26
CIT-212ENST00000543239 CNGA4Q8IV77 575 aa16.65■□□□□ 0.26
CIT-212ENST00000543239 SLC41A1Q8IVJ1 513 aa16.65■□□□□ 0.26
CIT-212ENST00000543239 PYROXD2Q8N2H3 581 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms