RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 HP1BP3Q5SSJ5 553 aaPredicted RBP7.95□□□□□ -1.14
LRP6-206ENST00000543091 C6orf163Q5TEZ5 329 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 GRIN3AQ8TCU5 1115 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 SPATA13Q96N96 652 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 HSD3B7Q9H2F3 369 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 SMARCAL1Q9NZC9 954 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 AGO1Q9UL18 857 aaKnown RBP7.95□□□□□ -1.14
LRP6-206ENST00000543091 RPS6KL1Q9Y6S9 549 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 TIMM44O43615 452 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 RNF40O75150 1001 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 CHEK2O96017 543 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 PRNPP04156 253 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 EDN1P05305 212 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 NPY2RP49146 381 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 C1orf220Q5T0J3 134 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 SLC8B1Q6J4K2 584 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 UGT3A1Q6NUS8 523 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 CEP68Q76N32 757 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 APTXQ7Z2E3 356 aaKnown RBP7.95□□□□□ -1.14
LRP6-206ENST00000543091 TTC7BQ86TV6 843 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 CACUL1Q86Y37 369 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 TBC1D19Q8N5T2 526 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 LMO3Q8TAP4 145 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 ALKBH8Q96BT7 664 aaKnown RBP7.95□□□□□ -1.14
LRP6-206ENST00000543091 ZBTB9Q96C00 473 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 CSPG4P5Q96PW8 444 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 TMEM209Q96SK2 561 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 LATS2Q9NRM7 1088 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 GKN1Q9NS71 199 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 HSFX1Q9UBD0 423 aa7.95□□□□□ -1.14
LRP6-206ENST00000543091 hCG_1818297A0A087WSY0 165 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 HCRTO43612 131 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 ATG13O75143 517 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 MTA2O94776 668 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 LRIG2O94898 1065 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 LCA5LO95447 670 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 ADH5P11766 374 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 NSUN2Q08J23 767 aaKnown RBP eCLIP7.94□□□□□ -1.14
LRP6-206ENST00000543091 TAF5Q15542 800 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 THEMIS2Q5TEJ8 643 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 ARID3BQ8IVW6 561 aaPredicted RBP7.94□□□□□ -1.14
LRP6-206ENST00000543091 TRIM48Q8IWZ4 208 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 LRRC8CQ8TDW0 803 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 SMARCD2Q92925 531 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 PSMG2Q969U7 264 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 FAM167BQ9BTA0 163 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 WHRNQ9P202 907 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 E2F8A0AVK6 867 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 HEATR9A2RTY3 570 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 GABRDO14764 452 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 RBL1P28749 1068 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 NDST2P52849 883 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 THOP1P52888 689 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 TAS2R40P59535 323 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 LRRC32Q14392 662 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 ACOX1Q15067 660 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 ITPRIPL2Q3MIP1 535 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 ATP13A4Q4VNC1 1196 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 RTL3Q8N8U3 475 aaKnown RBP7.94□□□□□ -1.14
LRP6-206ENST00000543091 CXorf38Q8TB03 319 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 KBTBD7Q8WVZ9 684 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 EXT2Q93063 718 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 ACDQ96AP0 544 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 MRPL38Q96DV4 380 aaKnown RBP7.94□□□□□ -1.14
LRP6-206ENST00000543091 SEMA3CQ99985 751 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 APOL2Q9BQE5 337 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 ABCF3Q9NUQ8 709 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.94□□□□□ -1.14
LRP6-206ENST00000543091 UBP1Q9NZI7 540 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 SHOC2Q9UQ13 582 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 ZFP37Q9Y6Q3 630 aaPredicted RBP7.94□□□□□ -1.14
LRP6-206ENST00000543091 TBX18O95935 607 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 EPHX1P07099 455 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 CDH5P33151 784 aaPredicted RBP7.94□□□□□ -1.14
LRP6-206ENST00000543091 HADHAP40939 763 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 MAGEA4P43358 317 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 ZNF132P52740 706 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 SLC12A1Q13621 1099 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 DMC1Q14565 340 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 CBX2Q14781 532 aaPredicted RBP7.94□□□□□ -1.14
LRP6-206ENST00000543091 RNF187Q5TA31 235 aaPredicted RBP7.94□□□□□ -1.14
LRP6-206ENST00000543091 ARMC6Q6NXE6 501 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 ALKAL1Q6UXT8 129 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 RTN4RL1Q86UN2 441 aaPredicted RBP7.94□□□□□ -1.14
LRP6-206ENST00000543091 CASKIN2Q8WXE0 1202 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 DRC3Q9H069 523 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 CLPBQ9H078 707 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 OSBPL2Q9H1P3 480 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 RASSF4Q9H2L5 321 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 CHST7Q9NS84 486 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 EPCAMP16422 314 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 AARSP49588 968 aaKnown RBP eCLIP7.94□□□□□ -1.14
LRP6-206ENST00000543091 HADHBP55084 474 aaKnown RBP7.94□□□□□ -1.14
LRP6-206ENST00000543091 NNTQ13423 1086 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 LBRQ14739 615 aaKnown RBP7.94□□□□□ -1.14
LRP6-206ENST00000543091 HS6ST3Q8IZP7 471 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 CLEC4CQ8WTT0 213 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 MLPHQ9BV36 600 aaPredicted RBP7.94□□□□□ -1.14
LRP6-206ENST00000543091 EVA1BQ9NVM1 165 aa7.94□□□□□ -1.14
LRP6-206ENST00000543091 CXXC1Q9P0U4 656 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms