RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 REPS1Q96D71 796 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 HGH1Q9BTY7 390 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 TMEM134Q9H6X4 195 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 KCNMB3Q9NPA1 279 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 SYNPO2Q9UMS6 1093 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 C2CD2Q9Y426 696 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 TNPO3Q9Y5L0 923 aaKnown RBP13.33□□□□□ -0.28
TNC-212ENST00000542877 BTN3A1O00481 513 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 TSC22D2O75157 780 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 S100A3P33764 101 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 TIMM50Q3ZCQ8 353 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 ZNF410Q86VK4 478 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 MCOLN3Q8TDD5 553 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 SMAD5Q99717 465 aaKnown RBP13.33□□□□□ -0.28
TNC-212ENST00000542877 PPP2R3BQ9Y5P8 575 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 ADAMTS13Q76LX8 1427 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 A0A0U1RQJ8 604 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 PDE9AO76083 593 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 RECQL5O94762 991 aaPredicted RBP13.33□□□□□ -0.28
TNC-212ENST00000542877 ERVK-10P10266 1014 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 COX4I1P13073 169 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 NAA20P61599 178 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 SQLEQ14534 574 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 FOXR2Q6PJQ5 311 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 CCDC149Q6ZUS6 474 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 FBXW8Q8N3Y1 598 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 ZNF276Q8N554 614 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 ELMO3Q96BJ8 720 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 SPATC1LQ9H0A9 340 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 ATP13A1Q9HD20 1204 aa13.33□□□□□ -0.28
TNC-212ENST00000542877 CASTOR2A6NHX0 329 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 MYBL2P10244 700 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 BMP6P22004 513 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 GSTT1P30711 240 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 EPHB3P54753 998 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 KCNJ2P63252 427 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 STARD3Q14849 445 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 TTC23Q5W5X9 447 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 NEPROQ6NW34 567 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 SLC30A10Q6XR72 485 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 GLT6D1Q7Z4J2 308 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 TFAP2DQ7Z6R9 452 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 TMEM159Q96B96 161 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 TPD52L3Q96J77 140 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 PANX3Q96QZ0 392 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 DYTNA2CJ06 578 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 H0YC42 278 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 UBXN8O00124 270 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 LTA4HP09960 611 aaKnown RBP13.32□□□□□ -0.28
TNC-212ENST00000542877 ACAT1P24752 427 aaKnown RBP13.32□□□□□ -0.28
TNC-212ENST00000542877 PHKG1Q16816 387 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 DHDDSQ86SQ9 333 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 PCDH20Q8N6Y1 951 aaKnown RBP13.32□□□□□ -0.28
TNC-212ENST00000542877 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.32□□□□□ -0.28
TNC-212ENST00000542877 ENKURQ8TC29 256 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 FAM163AQ96GL9 167 aaPredicted RBP13.32□□□□□ -0.28
TNC-212ENST00000542877 ELOVL4Q9GZR5 314 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 KANSL3Q9P2N6 904 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 INVSQ9Y283 1065 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 SMIM31A0A1B0GVY4 71 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 RBAK-RBAKDNI3L0D1 243 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 DYRK3O43781 588 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 CSDE1O75534 798 aaKnown RBP13.32□□□□□ -0.28
TNC-212ENST00000542877 OR56A5P0C7T3 313 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 ALOX12P18054 663 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 IL12RB1P42701 662 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 SLC25A3Q00325 362 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 SREBF2Q12772 1141 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 MAPK11Q15759 364 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 LY6KQ17RY6 165 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 SLC9A9Q8IVB4 645 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 AADATQ8N5Z0 425 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 HASPINQ8TF76 798 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 ARHGAP28Q9P2N2 729 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 TMCO1Q9UM00 188 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 SNX8Q9Y5X2 465 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 BIRC5O15392 142 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 MYL12AP19105 171 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 RPL22P35268 128 aaKnown RBP13.32□□□□□ -0.28
TNC-212ENST00000542877 ZNF143P52747 638 aaPredicted RBP13.32□□□□□ -0.28
TNC-212ENST00000542877 DLG4P78352 724 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 GTF2BQ00403 316 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 FAM187BQ17R55 369 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 STK40Q8N2I9 435 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 SYNDIG1Q9H7V2 258 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 PRDM4Q9UKN5 801 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 RCCD1A6NED2 376 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 MYL12BO14950 172 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 RNASEH1O60930 286 aaKnown RBP13.32□□□□□ -0.28
TNC-212ENST00000542877 LTFP02788 710 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 CYP2C18P33260 490 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 NOS2P35228 1153 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 NR1H2P55055 460 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 HUNKP57058 714 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 NEK10Q6ZWH5 1172 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 GPSM1Q86YR5 675 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 KAT5Q92993 513 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 ZBTB45Q96K62 511 aaPredicted RBP13.32□□□□□ -0.28
TNC-212ENST00000542877 SETD4Q9NVD3 440 aa13.32□□□□□ -0.28
TNC-212ENST00000542877 SNCAIPQ9Y6H5 919 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms