RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 CMTM3Q96MX0 182 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 NPAS1Q99742 590 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 NCAPGQ9BPX3 1015 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 CLSTN3Q9BQT9 956 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 DPCDQ9BVM2 203 aaPredicted RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 APOL6Q9BWW8 343 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 SH2D4AQ9H788 454 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 TTC12Q9H892 705 aaPredicted RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 XAB2Q9HCS7 855 aaKnown RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 SLC35C2Q9NQQ7 365 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 ARHGEF3Q9NR81 526 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 RNF181Q9P0P0 153 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 CPSF2Q9P2I0 782 aaKnown RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 SUCLA2Q9P2R7 463 aaPredicted RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 CDH22Q9UJ99 828 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 RASAL2Q9UJF2 1139 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 COPG1Q9Y678 874 aaKnown RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 ZFP37Q9Y6Q3 630 aaPredicted RBP4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 KIAA0556O60303 1618 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 ZFYVE16Q7Z3T8 1539 aa4.19□□□□□ -1.74
SFSWAP-211ENST00000542813 EFCAB5A4FU69 1503 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 ZMYM4Q5VZL5 1548 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 UGGT2Q9NYU1 1516 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 MYADML2A6NDP7 307 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 C3orf70A6NLC5 250 aaPredicted RBP4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 A8MXE2 369 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 PSMD9O00233 223 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 ZNF213O14771 459 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 MUSKO15146 869 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 PPM1DO15297 605 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 GPR42O15529 346 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 B4GALT4O60513 344 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 TBX10O75333 385 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 C1SP09871 688 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 CR2P20023 1033 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 CXCR5P32302 372 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 TTKP33981 857 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 HSPA1LP34931 641 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 THPOP40225 353 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 LMAN1P49257 510 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 RPS7P62081 194 aaKnown RBP4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 ARHGAP8P85298 464 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 SP2Q02086 613 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 BFSP1Q12934 665 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 TNFAIP1Q13829 316 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 COG2Q14746 738 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 GRM7Q14831 915 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 NTRK2Q16620 822 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 TCP11X2Q5H9J9 407 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 DCAF17Q5H9S7 520 aaPredicted RBP4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 SH2D4BQ5SQS7 431 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 ACSM6Q6P461 480 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 TMEM81Q6P7N7 255 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 SARM1Q6SZW1 724 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 CRELD2Q6UXH1 353 aaPredicted RBP4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 PLEKHH3Q7Z736 793 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 LINC00346Q8IVM7 164 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 CEP57L1Q8IYX8 460 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 CARFQ8N187 725 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 PLD5Q8N7P1 536 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 POMGNT2Q8NAT1 580 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 RAB40AQ8WXH6 277 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 KCNJ9Q92806 393 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 FAM149B1Q96BN6 582 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 WDYHV1Q96HA8 205 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 HIC2Q96JB3 615 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 ABHD1Q96SE0 405 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 TEX12Q9BXU0 123 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 MTRRQ9UBK8 725 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 GTF3C4Q9UKN8 822 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 ADAM18Q9Y3Q7 739 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 NCOA1Q15788 1441 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 KIF27Q86VH2 1401 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 FLT1P17948 1338 aa4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 DENND4BO75064 1496 aaPredicted RBP4.18□□□□□ -1.74
SFSWAP-211ENST00000542813 SRCAPQ6ZRS2 3230 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 ABCA9Q8IUA7 1624 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 ARHGEF12Q9NZN5 1544 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 CYP3A7-CYP3A51PA0A087WV96 503 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 GTPBP10A4D1E9 387 aaKnown RBP4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 NPIPB13A6NJU9 1138 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 NPIPB5A8MRT5 1133 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 A8MZ25 164 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 NPIPB4C9JG80 1138 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 PI4K2BG5E9Z4 385 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 LEFTY2O00292 366 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 SLC7A4O43246 635 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 NOBOXO60393 691 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 OR2C1O95371 312 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 GGPS1O95749 300 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 ARSAP15289 507 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 CYP3A7P24462 503 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 ATP5DP30049 168 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 AVPR2P30518 371 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 CPOXP36551 454 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 IGHMBP2P38935 993 aaKnown RBP4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 HSD17B4P51659 736 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 RPS6KA3P51812 740 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 ZNF41P51814 821 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms