RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 CEPT1Q9Y6K0 416 aa9.35□□□□□ -0.91
THBS3-211ENST00000541990 PRUNE2Q8WUY3 3088 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 H0YCG3 227 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 STX16-NPEPL1H3BU86 382 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 DGKIO75912 1065 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 PDGFRBP09619 1106 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 TFPTP0C1Z6 253 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 KRT3P12035 628 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 PTPN1P18031 435 aaKnown RBP9.34□□□□□ -0.91
THBS3-211ENST00000541990 XRCC1P18887 633 aaPredicted RBP9.34□□□□□ -0.91
THBS3-211ENST00000541990 PRKCHP24723 683 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 RBL1P28749 1068 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 GRK4P32298 578 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 CRHR1P34998 444 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 THOP1P52888 689 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 MTTPP55157 894 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 PKNOX1P55347 436 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 COG7P83436 770 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 APOFQ13790 326 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 PCLAFQ15004 111 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 LRRC8BQ6P9F7 803 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 TMCO2Q7Z6W1 182 aaPredicted RBP9.34□□□□□ -0.91
THBS3-211ENST00000541990 ZNF410Q86VK4 478 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 WDR75Q8IWA0 830 aaKnown RBP9.34□□□□□ -0.91
THBS3-211ENST00000541990 TRIM42Q8IWZ5 723 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 NIPA2Q8N8Q9 360 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 USP13Q92995 863 aaPredicted RBP9.34□□□□□ -0.91
THBS3-211ENST00000541990 BTBD9Q96Q07 612 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 MTG1Q9BT17 334 aaPredicted RBP9.34□□□□□ -0.91
THBS3-211ENST00000541990 SPC25Q9HBM1 224 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 MIOSQ9NXC5 875 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 HCSTQ9UBK5 93 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 ITGA11Q9UKX5 1188 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 CNTN6Q9UQ52 1028 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 TPP1O14773 563 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 AIM2O14862 343 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 DENRO43583 198 aaKnown RBP9.34□□□□□ -0.91
THBS3-211ENST00000541990 POMCP01189 267 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 APOEP02649 317 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 AMHP03971 560 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 ALDOAP04075 364 aaKnown RBP9.34□□□□□ -0.91
THBS3-211ENST00000541990 CDH2P19022 906 aaPredicted RBP9.34□□□□□ -0.91
THBS3-211ENST00000541990 ACLYP53396 1101 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 CYTH1Q15438 398 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 TRIP11Q15643 1979 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 TAZQ16635 292 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 ANKDD1AQ495B1 522 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 SLC9B1Q4ZJI4 515 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 LHX8Q68G74 356 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 FAM156AQ8NDB6 213 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 JADE3Q92613 823 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 PIWIL1Q96J94 861 aaKnown RBP9.34□□□□□ -0.91
THBS3-211ENST00000541990 CPXM1Q96SM3 734 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 GAD1Q99259 594 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 IMPG2Q9BZV3 1241 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 XYLT2Q9H1B5 865 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 PNPLA8Q9NP80 782 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 CISHQ9NSE2 258 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 RIMS3Q9UJD0 308 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 ZNF232Q9UNY5 417 aa9.34□□□□□ -0.91
THBS3-211ENST00000541990 CHD7Q9P2D1 2997 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 GOLGA8QA0A0J9YX86 632 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 GOLGA8OA6NCC3 632 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 RRN3P2A6NIE6 340 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 GOLGA8NF8WBI6 632 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 B4GALT4O60513 344 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 TRMUO75648 421 aaKnown RBP9.33□□□□□ -0.92
THBS3-211ENST00000541990 CSPG5O95196 566 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 LDHAP00338 332 aaKnown RBP9.33□□□□□ -0.92
THBS3-211ENST00000541990 HMGCRP04035 888 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 ERBB2P04626 1255 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 COX4I1P13073 169 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 TSHRP16473 764 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 SERPINB5P36952 375 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 MLH1P40692 756 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 PSMC1P62191 440 aaKnown RBP9.33□□□□□ -0.92
THBS3-211ENST00000541990 XIAPP98170 497 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 MS4A2Q01362 244 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 NOMO1Q15155 1222 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 TRNP1Q6NT89 227 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 TMEM35BQ8NCS4 154 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 UBA3Q8TBC4 463 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 HHIPL1Q96JK4 782 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 LENG8Q96PV6 779 aaPredicted RBP9.33□□□□□ -0.92
THBS3-211ENST00000541990 PKP2Q99959 881 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 ADPGKQ9BRR6 497 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.33□□□□□ -0.92
THBS3-211ENST00000541990 FAM49BQ9NUQ9 324 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 ZNF180Q9UJW8 692 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 PSMD13Q9UNM6 376 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 DMTF1Q9Y222 760 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 HEY1Q9Y5J3 304 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 SNX9Q9Y5X1 595 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 PSAT1Q9Y617 370 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 SMIM35A0A1B0GVV1 85 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 CASTOR2A6NHX0 329 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 XPO1O14980 1071 aaKnown RBP9.33□□□□□ -0.92
THBS3-211ENST00000541990 SPTLC1O15269 473 aa9.33□□□□□ -0.92
THBS3-211ENST00000541990 GAS2O43903 313 aaKnown RBP9.33□□□□□ -0.92
THBS3-211ENST00000541990 FKTNO75072 461 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms