RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 STK38Q15208 465 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 CNN3Q15417 329 aaKnown RBP5.82□□□□□ -1.48
CPSF7-220ENST00000541963 TCEAL5Q5H9L2 206 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 CLLU1OSQ5K130 101 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 ATL3Q6DD88 541 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 IL31Q6EBC2 164 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 LRRC55Q6ZSA7 311 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 C1orf186Q6ZWK4 172 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 LRRC56Q8IYG6 542 aaPredicted RBP5.82□□□□□ -1.48
CPSF7-220ENST00000541963 AOPEPQ8N6M6 819 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 BRIX1Q8TDN6 353 aaKnown RBP5.82□□□□□ -1.48
CPSF7-220ENST00000541963 LRTOMTQ8WZ04 291 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 PABPC5Q96DU9 382 aaKnown RBP5.82□□□□□ -1.48
CPSF7-220ENST00000541963 CPB2Q96IY4 423 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 LRRC37BQ96QE4 947 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 PLIN2Q99541 437 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 CDCA3Q99618 268 aaPredicted RBP5.82□□□□□ -1.48
CPSF7-220ENST00000541963 TMEM175Q9BSA9 504 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 NTPCRQ9BSD7 190 aaKnown RBP5.82□□□□□ -1.48
CPSF7-220ENST00000541963 TCHPQ9BT92 498 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 LRFN3Q9BTN0 628 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 MMTAG2Q9BU76 263 aaKnown RBP5.82□□□□□ -1.48
CPSF7-220ENST00000541963 COLEC11Q9BWP8 271 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 CCSER1Q9C0I3 900 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 LRRC27Q9C0I9 530 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 TLE6Q9H808 572 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 LARSQ9P2J5 1176 aaKnown RBP5.82□□□□□ -1.48
CPSF7-220ENST00000541963 CFAP45Q9UL16 551 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 OAZ3Q9UMX2 235 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 MTMR6Q9Y217 621 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 RUVBL1Q9Y265 456 aaKnown RBP5.82□□□□□ -1.48
CPSF7-220ENST00000541963 SSX2IPQ9Y2D8 614 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 SRPRBQ9Y5M8 271 aaKnown RBP5.82□□□□□ -1.48
CPSF7-220ENST00000541963 ACTL7AQ9Y615 435 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 CLIC4Q9Y696 253 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 MORC2Q9Y6X9 1032 aaPredicted RBP5.82□□□□□ -1.48
CPSF7-220ENST00000541963 ARID2Q68CP9 1835 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 FNDC1Q4ZHG4 1894 aaPredicted RBP5.81□□□□□ -1.48
CPSF7-220ENST00000541963 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.81□□□□□ -1.48
CPSF7-220ENST00000541963 A6NNZ2 444 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 PMM2O15305 246 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 PHGDHO43175 533 aaKnown RBP5.81□□□□□ -1.48
CPSF7-220ENST00000541963 B4GALT3O60512 393 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 ZC3H11AO75152 810 aaKnown RBP eCLIP5.81□□□□□ -1.48
CPSF7-220ENST00000541963 CXCL14O95715 111 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 GALTP07902 379 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 TYRP14679 529 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 ATF7P17544 494 aaPredicted RBP5.81□□□□□ -1.48
CPSF7-220ENST00000541963 MARCKSP29966 332 aaPredicted RBP5.81□□□□□ -1.48
CPSF7-220ENST00000541963 CA8P35219 290 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 NEK3P51956 506 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 SLC12A3P55017 1021 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 RAB1AP62820 205 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 CEBPZQ03701 1054 aaKnown RBP5.81□□□□□ -1.48
CPSF7-220ENST00000541963 MTM1Q13496 603 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 SMC1AQ14683 1233 aaKnown RBP5.81□□□□□ -1.48
CPSF7-220ENST00000541963 SLC39A14Q15043 492 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 PTPAQ15257 358 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 DCAF4L1Q3SXM0 396 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 LEXMQ3ZCV2 418 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 LONRF3Q496Y0 759 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 TMEM119Q4V9L6 283 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 FLYWCH1Q4VC44 716 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 UBXN11Q5T124 520 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 XP32Q5T750 250 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 RRAGBQ5VZM2 374 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 AFMIDQ63HM1 303 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 FAM111BQ6SJ93 734 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 CCDC73Q6ZRK6 1079 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 SLC39A11Q8N1S5 342 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 MYCT1Q8N699 235 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 LILRA3Q8N6C8 439 aaPredicted RBP5.81□□□□□ -1.48
CPSF7-220ENST00000541963 ACRBPQ8NEB7 543 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 NLGN4YQ8NFZ3 816 aaPredicted RBP5.81□□□□□ -1.48
CPSF7-220ENST00000541963 APOL6Q9BWW8 343 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 EIF2AQ9BY44 585 aaKnown RBP5.81□□□□□ -1.48
CPSF7-220ENST00000541963 C11orf54Q9H0W9 315 aaPredicted RBP5.81□□□□□ -1.48
CPSF7-220ENST00000541963 NRDE2Q9H7Z3 1164 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 UBE2ZQ9H832 354 aaPredicted RBP5.81□□□□□ -1.48
CPSF7-220ENST00000541963 ENTPD7Q9NQZ7 604 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 TBC1D13Q9NVG8 400 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 ODF2LQ9ULJ1 636 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 CLCA2Q9UQC9 943 aa5.81□□□□□ -1.48
CPSF7-220ENST00000541963 LAMA2P24043 3122 aaKnown RBP5.81□□□□□ -1.48
CPSF7-220ENST00000541963 ZMYM2Q9UBW7 1377 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 ARL5CA6NH57 179 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 B5MCH6 92 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 NT5C1B-RDH14C9J2C7 533 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 SPTLC2O15270 562 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 B4GALT5O43286 388 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 HOXA3O43365 443 aaPredicted RBP5.8□□□□□ -1.48
CPSF7-220ENST00000541963 LAMTOR5O43504 91 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 PPP6R2O75170 966 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 TBCAO75347 108 aaKnown RBP5.8□□□□□ -1.48
CPSF7-220ENST00000541963 CSPG5O95196 566 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 YEATS4O95619 227 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 CNOT4O95628 575 aaKnown RBP5.8□□□□□ -1.48
CPSF7-220ENST00000541963 POMCP01189 267 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 THP07101 528 aa5.8□□□□□ -1.48
CPSF7-220ENST00000541963 C8AP07357 584 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms