RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 I6L893 689 aaPredicted RBP15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 CAPN9O14815 690 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 P4HA2O15460 535 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 PLRG1O43660 514 aaKnown RBP15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 DFNA5O60443 496 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 GRAP2O75791 330 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 C1QL1O75973 258 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 SMC2O95347 1197 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 TBC1D3HP0C7X1 549 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 TAS2R38P59533 333 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 RNF219Q5W0B1 726 aaPredicted RBP15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 TBC1D3GQ6DHY5 549 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 TBC1D3CQ6IPX1 549 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 NAPEPLDQ6IQ20 393 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 Q6ZVU0 165 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 BEND5Q7L4P6 421 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 C14orf80Q86SX3 495 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 TMEM110Q86TL2 294 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 TBC1D3Q8IZP1 549 aaPredicted RBP15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 DEFB106AQ8N104 65 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 CPXM1Q96SM3 734 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 ANLNQ9NQW6 1124 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 OR51B4Q9Y5P0 310 aa15.93■□□□□ 0.14
CLSTN3-213ENST00000541953 TENM4Q6N022 2769 aa15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 F5H5T6 163 aa15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 BIN1O00499 593 aa15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 TRIM38O00635 465 aa15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 MOCS3O95396 460 aa15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 CTSLP07711 333 aa15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 JUPP14923 745 aa15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 EIF2S3P41091 472 aaKnown RBP15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 ABCG1P45844 678 aa15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 RXRGP48443 463 aa15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 YWHAZP63104 245 aaKnown RBP15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 PASD1Q8IV76 773 aa15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 KLK6Q92876 244 aa15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 NXPE2Q96DL1 559 aa15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 SLC2A13Q96QE2 648 aa15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 SPAG5Q96R06 1193 aa15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 CRACR2AQ9BSW2 395 aa15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 GTPBP4Q9BZE4 634 aaKnown RBP15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 FAM204AQ9H8W3 233 aa15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 UBE2TQ9NPD8 197 aaPredicted RBP15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 VANGL2Q9ULK5 521 aa15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 SNX10Q9Y5X0 201 aa15.92■□□□□ 0.14
CLSTN3-213ENST00000541953 COL27A1Q8IZC6 1860 aaPredicted RBP15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 A0A1B0GVM2 712 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 FAM170AA1A519 330 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 TCAF2A6NFQ2 919 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 SART1O43290 800 aaKnown RBP15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 THAP12O43422 761 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 MT-CO1P00395 513 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 AFPP02771 609 aaKnown RBP15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 PRLRP16471 622 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 TFE3P19532 575 aaPredicted RBP15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 GNA15P30679 374 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 ACADSBP45954 432 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 PLK1P53350 603 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 PROX2Q3B8N5 592 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 ARTNQ5T4W7 220 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 CCDC117Q8IWD4 279 aaPredicted RBP15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 SLC25A45Q8N413 288 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 MFSD2AQ8NA29 543 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 STK32AQ8WU08 396 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 CCDC34Q96HJ3 373 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 TIGD1Q96MW7 591 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 FEM1AQ9BSK4 669 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 THAP9Q9H5L6 903 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 FZD3Q9NPG1 666 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 UCKL1Q9NWZ5 548 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 DDIT4Q9NX09 232 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 PPM1HQ9ULR3 514 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 HS3ST4Q9Y661 456 aa15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 TDRD6O60522 2096 aaKnown RBP15.91■□□□□ 0.14
CLSTN3-213ENST00000541953 E9PAM4 449 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 K7ERQ8 282 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 SIGLEC6O43699 453 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 ATP9BO43861 1147 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 BNIP3LO60238 219 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 SNAP91O60641 907 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 CNTN5O94779 1100 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 PNMA6AP0CW24 399 aaPredicted RBP15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 GIMD1P0DJR0 217 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 MYF5P13349 255 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 SLC9A1P19634 815 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 ARRB1P49407 418 aaPredicted RBP15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 MARSP56192 900 aaKnown RBP15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 INSM1Q01101 510 aaPredicted RBP15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 AUHQ13825 339 aaKnown RBP15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 MORC3Q14149 939 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 DLG2Q15700 870 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 C6orf118Q5T5N4 469 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 PIP5KL1Q5T9C9 394 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 FAM183BPQ6ZVS7 135 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 ATP6V0D2Q8N8Y2 350 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 ARRDC3Q96B67 414 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 RPRD1AQ96P16 312 aaPredicted RBP15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 NOX5Q96PH1 765 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 MED15Q96RN5 788 aa15.9■□□□□ 0.14
CLSTN3-213ENST00000541953 PSMB7Q99436 277 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms