RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 KLHDC10Q6PID8 442 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 C11orf57Q6ZUT1 292 aaPredicted RBP10.11□□□□□ -0.79
CHFR-220ENST00000541817 CCDC186Q7Z3E2 898 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 TICAM1Q8IUC6 712 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 CBWD2Q8IUF1 395 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 SYCP3Q8IZU3 236 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 AHI1Q8N157 1196 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 CPXM2Q8N436 756 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 C12orf29Q8N999 325 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 KIAA1524Q8TCG1 905 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 GRAMD1AQ96CP6 724 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 MRGPRX3Q96LB0 322 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 BPIFA3Q9BQP9 254 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 SLC12A9Q9BXP2 914 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 FGFBP2Q9BYJ0 223 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 DCLK3Q9C098 648 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 SDCBP2Q9H190 292 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 DNAJC28Q9NX36 388 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 FOXJ2Q9P0K8 574 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 SEPT10Q9P0V9 454 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 STIM2Q9P246 746 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 HOOK1Q9UJC3 728 aaKnown RBP10.11□□□□□ -0.79
CHFR-220ENST00000541817 PCDHGA7Q9Y5G6 932 aa10.11□□□□□ -0.79
CHFR-220ENST00000541817 SPENQ96T58 3664 aaKnown RBP10.11□□□□□ -0.79
CHFR-220ENST00000541817 EME2A4GXA9 379 aaPredicted RBP10.1□□□□□ -0.79
CHFR-220ENST00000541817 PRAMEF26H0Y7S4 382 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 DYNC1I1O14576 645 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 KIF20AO95235 890 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 DLATP10515 647 aaKnown RBP10.1□□□□□ -0.79
CHFR-220ENST00000541817 RALAP11233 206 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 VAV1P15498 845 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 PFKFB1P16118 471 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 MLLT3P42568 568 aaPredicted RBP10.1□□□□□ -0.79
CHFR-220ENST00000541817 SYKP43405 635 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 CD97P48960 835 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 OXCT1P55809 520 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 ST8SIA6P61647 398 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 SPIDRQ14159 915 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 HNRNPA1L2Q32P51 320 aaKnown RBP10.1□□□□□ -0.79
CHFR-220ENST00000541817 C1QL3Q5VWW1 255 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 SLC22A18ASQ8N1D0 253 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 GPD1LQ8N335 351 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 C9orf43Q8TAL5 461 aaPredicted RBP10.1□□□□□ -0.79
CHFR-220ENST00000541817 TMA16Q96EY4 203 aaKnown RBP10.1□□□□□ -0.79
CHFR-220ENST00000541817 ACCSQ96QU6 501 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 CCDC3Q9BQI4 270 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 STRA6Q9BX79 667 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 ST6GALNAC4Q9H4F1 302 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 MRPL44Q9H9J2 332 aaKnown RBP10.1□□□□□ -0.79
CHFR-220ENST00000541817 CSNK1G1Q9HCP0 422 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 PREBQ9HCU5 417 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 EVA1BQ9NVM1 165 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 FAM13BQ9NYF5 915 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 HMGXB4Q9UGU5 601 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 SLCO3A1Q9UIG8 710 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 INTS6Q9UL03 887 aaKnown RBP10.1□□□□□ -0.79
CHFR-220ENST00000541817 POLQO75417 2590 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 OTOGQ6ZRI0 2925 aa10.1□□□□□ -0.79
CHFR-220ENST00000541817 GOLGA6L7A0A1B0GV03 622 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 NEMP2A6NFY4 417 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 RRP9O43818 475 aaKnown RBP10.09□□□□□ -0.79
CHFR-220ENST00000541817 TBL1XO60907 577 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 GCNT3O95395 438 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 JMJD7P0C870 316 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 TNNI1P19237 187 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 C5AR1P21730 350 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 GARTP22102 1010 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 PRPHP41219 470 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 CSKP41240 450 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 HARS2P49590 506 aaKnown RBP10.09□□□□□ -0.79
CHFR-220ENST00000541817 MAPK10P53779 464 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 C1QBPQ07021 282 aaKnown RBP10.09□□□□□ -0.79
CHFR-220ENST00000541817 OVGP1Q12889 678 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 NR0B2Q15466 257 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 RILPL1Q5EBL4 403 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 CAPRIN2Q6IMN6 1127 aaKnown RBP10.09□□□□□ -0.79
CHFR-220ENST00000541817 ZCCHC8Q6NZY4 707 aaKnown RBP10.09□□□□□ -0.79
CHFR-220ENST00000541817 RFWD3Q6PCD5 774 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 MMS22LQ6ZRQ5 1243 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 CLEC20AQ6ZU45 233 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 DSG4Q86SJ6 1040 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 FAM217AQ8IXS0 508 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 AOPEPQ8N6M6 819 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.09□□□□□ -0.79
CHFR-220ENST00000541817 ZNF548Q8NEK5 533 aaPredicted RBP10.09□□□□□ -0.79
CHFR-220ENST00000541817 NDRG1Q92597 394 aaKnown RBP10.09□□□□□ -0.79
CHFR-220ENST00000541817 ZNF516Q92618 1163 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 RAD54LQ92698 747 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 USP7Q93009 1102 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 RPL10LQ96L21 214 aaKnown RBP10.09□□□□□ -0.79
CHFR-220ENST00000541817 DUSP23Q9BVJ7 150 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 KCNF1Q9H3M0 494 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 USP29Q9HBJ7 922 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.09□□□□□ -0.79
CHFR-220ENST00000541817 MARCH2Q9P0N8 246 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 KLF15Q9UIH9 416 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 EXOC7Q9UPT5 735 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 DMTF1Q9Y222 760 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 CSMD1Q96PZ7 3565 aa10.09□□□□□ -0.79
CHFR-220ENST00000541817 UBE4BO95155 1302 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms